RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 IFT80Q9P2H3 777 aaPredicted RBP16.26■□□□□ 0.19
LIME1-202ENST00000444951 TRPC4Q9UBN4 977 aa16.26■□□□□ 0.19
LIME1-202ENST00000444951 HECTD1Q9ULT8 2610 aa16.26■□□□□ 0.19
LIME1-202ENST00000444951 H0YIG0 161 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 TMPRSS11DO60235 418 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 WISP1O95388 367 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 TGDSO95455 350 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 FAM58BPP0C7Q3 252 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 ALOX15P16050 662 aaPredicted RBP16.25■□□□□ 0.19
LIME1-202ENST00000444951 LBPP18428 481 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 DRD4P21917 467 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 PRPH2P23942 346 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 IL23RQ5VWK5 629 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 PRSS58Q8IYP2 241 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 CACNA2D3Q8IZS8 1091 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 CA13Q8N1Q1 262 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 ZSCAN1Q8NBB4 408 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 OR51Q1Q8NH59 317 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 CLHC1Q8NHS4 586 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 MARK4Q96L34 752 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 MAPKAP1Q9BPZ7 522 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 ELAC2Q9BQ52 826 aaKnown RBP16.25■□□□□ 0.19
LIME1-202ENST00000444951 FAM117AQ9C073 453 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 CLMPQ9H6B4 373 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 DDX31Q9H8H2 851 aaKnown RBP16.25■□□□□ 0.19
LIME1-202ENST00000444951 GPN3Q9UHW5 284 aaPredicted RBP16.25■□□□□ 0.19
LIME1-202ENST00000444951 PADI1Q9ULC6 663 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 DLGAP4Q9Y2H0 992 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 COL12A1Q99715 3063 aa16.25■□□□□ 0.19
LIME1-202ENST00000444951 A0A0A6YYD5 115 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 E9PBE3 544 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 FAM227AF5H4B4 570 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 KLHL41O60662 606 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 RAD1O60671 282 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 TSFMP43897 325 aaKnown RBP16.24■□□□□ 0.19
LIME1-202ENST00000444951 XCR1P46094 333 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 ARFIP1P53367 373 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 LIM2P55344 173 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 HNRNPH2P55795 449 aaKnown RBP16.24■□□□□ 0.19
LIME1-202ENST00000444951 DSG2Q14126 1118 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 ERV3-1Q14264 604 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 KIAA0040Q15053 153 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 LSM12Q3MHD2 195 aaKnown RBP16.24■□□□□ 0.19
LIME1-202ENST00000444951 MFSD4BQ5TF39 518 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 ZNF385CQ66K41 422 aaPredicted RBP16.24■□□□□ 0.19
LIME1-202ENST00000444951 NIPAL1Q6NVV3 410 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 SHISA6Q6ZSJ9 500 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 LARP4Q71RC2 724 aaKnown RBP eCLIP16.24■□□□□ 0.19
LIME1-202ENST00000444951 COX15Q7KZN9 410 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 MTERF4Q7Z6M4 381 aaKnown RBP16.24■□□□□ 0.19
LIME1-202ENST00000444951 NLGN4XQ8N0W4 816 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 LIX1Q8N485 282 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 IL22RA1Q8N6P7 574 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 FAM47BQ8NA70 645 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 NLGN4YQ8NFZ3 816 aaPredicted RBP16.24■□□□□ 0.19
LIME1-202ENST00000444951 SPRY4Q9C004 299 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 KCNK13Q9HB14 408 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 TCF7L2Q9NQB0 619 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 SLC22A11Q9NSA0 550 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 CTSFQ9UBX1 484 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 BAIAP2L1Q9UHR4 511 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 MCM8Q9UJA3 840 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 ADAM29Q9UKF5 820 aa16.24■□□□□ 0.19
LIME1-202ENST00000444951 EIF3LQ9Y262 564 aaKnown RBP16.24■□□□□ 0.19
LIME1-202ENST00000444951 HEMK1Q9Y5R4 338 aaPredicted RBP16.24■□□□□ 0.19
LIME1-202ENST00000444951 UBR5O95071 2799 aaPredicted RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 C9J4A7 227 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 PSMD12O00232 456 aaPredicted RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 TERTO14746 1132 aaKnown RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 B4GALT2O60909 372 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 PRKRAO75569 313 aaKnown RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 CDC123O75794 336 aaPredicted RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 SCELO95171 688 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 PIM1P11309 404 aaPredicted RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 RNH1P13489 461 aaKnown RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 CPN2P22792 545 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 MAPK1P28482 360 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 ARFIP2P53365 341 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 FOXL2P58012 376 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 TAS2R50P59544 299 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 ERVK-8P63133 956 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 EMX2Q04743 252 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 TUBB8Q3ZCM7 444 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 TMEM198Q66K66 360 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 GPR180Q86V85 440 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 ZCCHC7Q8N3Z6 543 aaKnown RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 ESX1Q8N693 406 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 CEP70Q8NHQ1 597 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 ACTRT2Q8TDY3 377 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 C16orf78Q8WTQ4 265 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 MAELQ96JY0 434 aaKnown RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 LRFN5Q96NI6 719 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 TSSK3Q96PN8 268 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 SIKE1Q9BRV8 207 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 NPLQ9BXD5 320 aaPredicted RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 EPN3Q9H201 632 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 LYARQ9NX58 379 aaKnown RBP16.23■□□□□ 0.19
LIME1-202ENST00000444951 DAPP1Q9UN19 280 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 MAP4K5Q9Y4K4 846 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 ATG4BQ9Y4P1 393 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms