RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 GATA5Q9BWX5 397 aaPredicted RBP14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 CENPHQ9H3R5 247 aa14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 FARSBQ9NSD9 589 aaKnown RBP14.12□□□□□ -0.15
CSNK1E-210ENST00000442216 MASP2O00187 686 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 UBFD1O14562 309 aaKnown RBP14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 NPHS1O60500 1241 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 C1QL1O75973 258 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 PRR35P0CG20 571 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 MAOAP21397 527 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 CPN2P22792 545 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 TLX1P31314 330 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 SERPINB5P36952 375 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 BUD31P41223 144 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 ACTN3Q08043 901 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 C19orf57Q0VDD7 668 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 TERF2Q15554 542 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 SGO1Q5FBB7 561 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 AGAP7PQ5VUJ5 663 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 PAPD4Q6PIY7 484 aaKnown RBP14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 CYP20A1Q6UW02 462 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 IGFL3Q6UXB1 125 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 GPR180Q86V85 440 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 ZNF843Q8N446 348 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 FAM47BQ8NA70 645 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 M1APQ8TC57 530 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 AGAP4Q96P64 663 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 CSF3RQ99062 836 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 SORBS1Q9BX66 1292 aaKnown RBP14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 NECTIN3Q9NQS3 549 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 ZNF71Q9NQZ8 489 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 ARGLU1Q9NWB6 273 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 VPS29Q9UBQ0 182 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 FBXW2Q9UKT8 454 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 SLC12A4Q9UP95 1085 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 CLDN16Q9Y5I7 305 aa14.11□□□□□ -0.15
CSNK1E-210ENST00000442216 CROCCQ5TZA2 2017 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 GOLGA6L10A6NI86 522 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 B8ZZF3 427 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 PROM1O43490 865 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 DPM1O60762 260 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 SEC24DO94855 1032 aaPredicted RBP14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 ZWINTO95229 277 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 PRB1P04280 392 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 BPGMP07738 259 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 FAM58BPP0C7Q3 252 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 UROSP10746 265 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 PPP2R1BP30154 601 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 HNRNPFP52597 415 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 HNRNPH2P55795 449 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 TNFRSF17Q02223 184 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 KLRB1Q12918 225 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 NFATC3Q12968 1075 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 SLC13A2Q13183 592 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 SERTAD2Q14140 314 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 CASP8Q14790 479 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 CRB2Q5IJ48 1285 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 IGFL2Q6UWQ7 119 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 RNF165Q6ZSG1 346 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 TMEM52Q8NDY8 209 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 TM9SF4Q92544 642 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 TANKQ92844 425 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 LMF1Q96S06 567 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 MRPL1Q9BYD6 325 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 MMP25Q9NPA2 562 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 ANAPC2Q9UJX6 822 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 ASB4Q9Y574 426 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 TIMM22Q9Y584 194 aa14.1□□□□□ -0.15
CSNK1E-210ENST00000442216 IGHV3-20A0A0C4DH32 117 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 SAGE2PA6NJ88 616 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 K7EM74 188 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 BIRC5O15392 142 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 TMPRSS11DO60235 418 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 GUCY1B2O75343 617 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 EEDO75530 441 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 CRCPO75575 148 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 PDGFAP04085 211 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 TPP2P29144 1249 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 FOXA1P55317 472 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 SLC26A5P58743 744 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 TRA2BP62995 288 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 IGLV3-21P80748 117 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 TBL3Q12788 808 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 BTBD16Q32M84 506 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 TCHHL1Q5QJ38 904 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 H3F3CQ6NXT2 135 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 EFCAB3Q8N7B9 438 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 CHTF18Q8WVB6 975 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 PSMF1Q92530 271 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 MECRQ9BV79 373 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 RPF2Q9H7B2 306 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 WDR41Q9HAD4 459 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 TMBIM4Q9HC24 238 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 EML4Q9HC35 981 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 ADAP2Q9NPF8 381 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 SIRT5Q9NXA8 310 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 VTI1BQ9UEU0 232 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 PPIEQ9UNP9 301 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 ATG4BQ9Y4P1 393 aa14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 TLN1Q9Y490 2541 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-210ENST00000442216 ARHGAP10A1A4S6 786 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms