RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 MCOLN1Q9GZU1 580 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 TMEM161AQ9NX61 479 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 ACSL6Q9UKU0 697 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 SYN3O14994 580 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 AOAHP28039 575 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 ALDH9A1P49189 494 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 UBE3AQ05086 875 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 PCDH1Q08174 1060 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 ADNP2Q6IQ32 1131 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 FBXL6Q8N531 539 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 OR4K1Q8NGD4 311 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 LRRC20Q8TCA0 184 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 MTERF3Q96E29 417 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 QRFPRQ96P65 431 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 NELL2Q99435 816 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 MND1Q9BWT6 205 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 GTPBP2Q9BX10 602 aaKnown RBP19.38■□□□□ 0.69
SHOX2-203ENST00000441443 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.38■□□□□ 0.69
SHOX2-203ENST00000441443 RBFOX1Q9NWB1 397 aaKnown RBP19.38■□□□□ 0.69
SHOX2-203ENST00000441443 MYL12BO14950 172 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 MPZL2O60487 215 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 VNN2O95498 520 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 ATF6P18850 670 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 MYL12AP19105 171 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 ITGALP20701 1170 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 ACRV1P26436 265 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 OR1D2P34982 312 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 CCL23P55773 120 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 ARF5P84085 180 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 HSPA14Q0VDF9 509 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 CHRNA6Q15825 494 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 CCDC85BQ15834 202 aaPredicted RBP19.38■□□□□ 0.69
SHOX2-203ENST00000441443 RNF219Q5W0B1 726 aaPredicted RBP19.38■□□□□ 0.69
SHOX2-203ENST00000441443 NCEH1Q6PIU2 408 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 USP30Q70CQ3 517 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 NPAS3Q8IXF0 933 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 TAGAPQ8N103 731 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 PIP5K1AQ99755 562 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 RACGAP1Q9H0H5 632 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 DIABLOQ9NR28 239 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 MARCH5Q9NX47 278 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 GLTPQ9NZD2 209 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 FCF1Q9Y324 198 aaKnown RBP19.38■□□□□ 0.69
SHOX2-203ENST00000441443 ACSL4O60488 711 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 CLDN7O95471 211 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 CD160O95971 181 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 PTX3P26022 381 aaPredicted RBP19.37■□□□□ 0.69
SHOX2-203ENST00000441443 RRAS2P62070 204 aaPredicted RBP19.37■□□□□ 0.69
SHOX2-203ENST00000441443 SCARB2Q14108 478 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 TAF12Q16514 161 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 NANOGP1Q8N7R0 232 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 SLC6A18Q96N87 628 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 TM6SF2Q9BZW4 377 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 VPS29Q9UBQ0 182 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 VWA8A3KMH1 1905 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 ALPK3Q96L96 1907 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 SCAMP2O15127 329 aaKnown RBP19.37■□□□□ 0.69
SHOX2-203ENST00000441443 PIPP12273 146 aaPredicted RBP19.37■□□□□ 0.69
SHOX2-203ENST00000441443 ARSBP15848 533 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 CST5P28325 142 aaPredicted RBP19.37■□□□□ 0.69
SHOX2-203ENST00000441443 CDH4P55283 916 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 ACSM2AQ08AH3 577 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 MRPL28Q13084 256 aaKnown RBP19.37■□□□□ 0.69
SHOX2-203ENST00000441443 MAB21L1Q13394 359 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 ACSM2BQ68CK6 577 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 FAAH2Q6GMR7 532 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 KIAA1841Q6NSI8 718 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 DEFB128Q7Z7B8 93 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 CELF5Q8N6W0 485 aaKnown RBP19.37■□□□□ 0.69
SHOX2-203ENST00000441443 PKP4Q99569 1192 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 B3GAT2Q9NPZ5 323 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 NINQ8N4C6 2090 aa19.37■□□□□ 0.69
SHOX2-203ENST00000441443 FADS2P1A8MWK0 482 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 APOL3O95236 402 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 IL1AP01583 271 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 ATN1P54259 1190 aaPredicted RBP19.36■□□□□ 0.69
SHOX2-203ENST00000441443 ZNF91Q05481 1191 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 GGTA1PQ4G0N0 100 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 BCL7CQ8WUZ0 217 aaPredicted RBP19.36■□□□□ 0.69
SHOX2-203ENST00000441443 PCNPQ8WW12 178 aaKnown RBP19.36■□□□□ 0.69
SHOX2-203ENST00000441443 C1GALT1C1Q96EU7 318 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 ANKRA2Q9H9E1 313 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 ZFYVE1Q9HBF4 777 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 OR6C75A6NL08 312 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 H3BN98 237 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 PLOD3O60568 738 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 XCR1P46094 333 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 GPR17Q13304 367 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 METTL2BQ6P1Q9 378 aaKnown RBP19.36■□□□□ 0.69
SHOX2-203ENST00000441443 CNIH2Q6PI25 160 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 LRRC70Q7Z2Q7 622 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 OR8H3Q8N146 312 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 L3MBTL4Q8NA19 623 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 GPR156Q8NFN8 814 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 OR52P1PQ8NH57 321 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 TSSK6Q9BXA6 273 aa19.36■□□□□ 0.69
SHOX2-203ENST00000441443 SPIN1Q9Y657 262 aaPredicted RBP19.36■□□□□ 0.69
SHOX2-203ENST00000441443 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.35■□□□□ 0.69
SHOX2-203ENST00000441443 SLC38A8A6NNN8 435 aa19.35■□□□□ 0.69
SHOX2-203ENST00000441443 LYRM1O43325 122 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms