RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 MRPS33Q9Y291 106 aaKnown RBP15.19■□□□□ 0.02
SNRPB-202ENST00000438552 TRAF6Q9Y4K3 522 aa15.19■□□□□ 0.02
SNRPB-202ENST00000438552 ATG4BQ9Y4P1 393 aa15.19■□□□□ 0.02
SNRPB-202ENST00000438552 DNAJC15Q9Y5T4 150 aa15.19■□□□□ 0.02
SNRPB-202ENST00000438552 SPACA6W5XKT8 324 aa15.19■□□□□ 0.02
SNRPB-202ENST00000438552 IGHV3-20A0A0C4DH32 117 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 ARHGAP10A1A4S6 786 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 PIP5K1BO14986 540 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 PRMT3O60678 531 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 SKAP2O75563 359 aaPredicted RBP15.18■□□□□ 0.02
SNRPB-202ENST00000438552 CYC1P08574 325 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 LINC00032P0C843 101 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 COX6A1P12074 109 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 GRK2P25098 689 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 SLC1A6P48664 564 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 ACSM2AQ08AH3 577 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 STX3Q13277 289 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 PCOLCEQ15113 449 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 NSDHLQ15738 373 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 LINC00303Q3SY05 128 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 SPDYAQ5MJ70 313 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 CCNYL2Q5T2Q4 361 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 ACSM2BQ68CK6 577 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 C18orf63Q68DL7 685 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 TRIM46Q7Z4K8 759 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 GPR180Q86V85 440 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 SCUBE1Q8IWY4 988 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 DDIASQ8IXT1 998 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 ZNF595Q8IYB9 648 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 ZNF781Q8N8C0 355 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 OR2T11Q8NH01 316 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 CHTF18Q8WVB6 975 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 APOBEC4Q8WW27 367 aaKnown RBP15.18■□□□□ 0.02
SNRPB-202ENST00000438552 NACC2Q96BF6 587 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 PTCHD1Q96NR3 888 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 EBPLQ9BY08 206 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 ING2Q9H160 280 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 PRDM9Q9NQV7 894 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 PRTFDC1Q9NRG1 225 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 TEX10Q9NXF1 929 aaPredicted RBP15.18■□□□□ 0.02
SNRPB-202ENST00000438552 ADAM29Q9UKF5 820 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 MMACHCQ9Y4U1 282 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 CCL27Q9Y4X3 112 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 ASB4Q9Y574 426 aa15.18■□□□□ 0.02
SNRPB-202ENST00000438552 LOC102723996A0A087X1L8 192 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 IGKV3D-11A0A0A0MRZ8 115 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 IGHV1-45A0A0A0MS14 117 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 PCDH7O60245 1069 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 SEC24DO94855 1032 aaPredicted RBP15.17■□□□□ 0.02
SNRPB-202ENST00000438552 AIFM1O95831 613 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 FGF4P08620 206 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 FAM87AP0C7U9 286 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 NR2F6P10588 404 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 MAPK12P53778 367 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 RRADP55042 308 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 POLE2P56282 527 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 PPP2R2AP63151 447 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 RAE1P78406 368 aaKnown RBP15.17■□□□□ 0.02
SNRPB-202ENST00000438552 SLC13A2Q13183 592 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 UGT3A2Q3SY77 523 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 SPIN4Q56A73 249 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 DCAF10Q5QP82 559 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 MED25Q71SY5 747 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 CPEB2Q7Z5Q1 589 aaKnown RBP15.17■□□□□ 0.02
SNRPB-202ENST00000438552 CLYBLQ8N0X4 340 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 AMER2Q8N7J2 671 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 PLPP5Q8NEB5 264 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 FER1L6-AS2Q96M78 137 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 ZNF160Q9HCG1 818 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 C19orf25Q9UFG5 118 aaPredicted RBP15.17■□□□□ 0.02
SNRPB-202ENST00000438552 RAP2CQ9Y3L5 183 aa15.17■□□□□ 0.02
SNRPB-202ENST00000438552 NSG1A0A0A6YYJ2 146 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 MYOCOSA0A1B0GUC4 107 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 A0A1W2PQ72 361 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 A0A1W2PR48 441 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 TCRBV16S1A1N1A0A5B0 115 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 GLOD5A6NK44 160 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 SLC28A1O00337 649 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 CLDN4O14493 209 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 PCDH17O14917 1159 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 PROM1O43490 865 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 ATP8B1O43520 1251 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 LDB3O75112 727 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 RSL1D1O76021 490 aaKnown RBP15.16■□□□□ 0.02
SNRPB-202ENST00000438552 HPP00738 406 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 PPP2R1BP30154 601 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 TIA1P31483 386 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■■■■■ 35.7
SNRPB-202ENST00000438552 BUD31P41223 144 aaPredicted RBP15.16■□□□□ 0.02
SNRPB-202ENST00000438552 HSD17B7P56937 341 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 OR4D2P58180 307 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 ID2Q02363 134 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 NR6A1Q15406 480 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 PDCD2Q16342 344 aaPredicted RBP15.16■□□□□ 0.02
SNRPB-202ENST00000438552 SFT2D3Q587I9 215 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 RIPOR1Q6ZS17 1223 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 RNF165Q6ZSG1 346 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 APLFQ8IW19 511 aaPredicted RBP15.16■□□□□ 0.02
SNRPB-202ENST00000438552 MMP21Q8N119 569 aa15.16■□□□□ 0.02
SNRPB-202ENST00000438552 TMEM102Q8N9M5 508 aaPredicted RBP15.16■□□□□ 0.02
SNRPB-202ENST00000438552 CLEC1AQ8NC01 280 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms