RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TPSG1Q9NRR2 321 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 HPF1Q9NWY4 346 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 COPS7AQ9UBW8 275 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 SLC22A14Q9Y267 594 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 OARD1Q9Y530 152 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 FBN2P35556 2912 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 A0A0G2JN53 185 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 A0A1B0GTH9 108 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 NCF1BA6NI72 391 aaPredicted RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 FAM90A27PA6NNH2 459 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 NCF1CA8MVU1 366 aaPredicted RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 FOXO6A8MYZ6 492 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CDC7O00311 574 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 DYRK3O43781 588 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 HS6ST1O60243 411 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 RGS9O75916 674 aaPredicted RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 C1GALT1C1LP0DN25 315 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 COX7A2P14406 83 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 NCF1P14598 390 aaPredicted RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 TNNI3P19429 210 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 TFEBP19484 476 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CHRNB4P30926 498 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 PGGT1BP53609 377 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 MTTPP55157 894 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 RAB38P57729 211 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 GPR85P60893 370 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 PPIAP62937 165 aaKnown RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 CDKL1Q00532 357 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 TLE4Q04727 773 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 STX4Q12846 297 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 PDIA2Q13087 525 aaKnown RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 TSNQ15631 228 aaKnown RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 ELAVL1Q15717 326 aaKnown RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 HIST2H2ACQ16777 129 aaPredicted RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 PPP1R3AQ16821 1122 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 XKR6Q5GH73 641 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 STEAP4Q687X5 459 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 HIST2H2AA3Q6FI13 130 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 HSDL2Q6YN16 418 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 RGS9BPQ6ZS82 235 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CEP128Q6ZU80 1094 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CLNKQ7Z7G1 428 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 SLC22A16Q86VW1 577 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 ZC3HC1Q86WB0 502 aaKnown RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 GPSM1Q86YR5 675 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 IGDCC3Q8IVU1 814 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 SULF2Q8IWU5 870 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 KLHDC8AQ8IYD2 350 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CA13Q8N1Q1 262 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 PSD4Q8NDX1 1056 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 OR2L5Q8NG80 312 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 OR5M3Q8NGP4 307 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 FAM57AQ8TBR7 257 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CREB3L4Q8TEY5 395 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 RND1Q92730 232 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CDKL2Q92772 493 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 SLCO2A1Q92959 643 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 NCLNQ969V3 563 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 KIAA1191Q96A73 305 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 C14orf79Q96F83 325 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CAPZA3Q96KX2 299 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 SERINC2Q96SA4 455 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CENPKQ9BS16 269 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 EFCAB11Q9BUY7 163 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 NPLQ9BXD5 320 aaPredicted RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 TRIM31Q9BZY9 425 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 REXO4Q9GZR2 422 aaKnown RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 RHOJQ9H4E5 214 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 KLHL31Q9H511 634 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 TRIM45Q9H8W5 580 aaPredicted RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 KCNJ16Q9NPI9 418 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 NECTIN3Q9NQS3 549 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 DNAJC11Q9NVH1 559 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CD274Q9NZQ7 290 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 YARS2Q9Y2Z4 477 aaKnown RBP7.23□□□□□ -1.25
VPS50-204ENST00000438395 PSAT1Q9Y617 370 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 ADGRG4Q8IZF6 3080 aa7.23□□□□□ -1.25
VPS50-204ENST00000438395 CPAMD8Q8IZJ3 1885 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 ANKHD1Q8IWZ3 2542 aaKnown RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 FAM166BA8MTA8 275 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 ZNHIT1O43257 154 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 DNAJB6O75190 326 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 CLEC3AO75596 197 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 OR2J2O76002 312 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 WISP2O76076 250 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 PDE9AO76083 593 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 CERS1P27544 350 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 HNRNPH1P31943 449 aaKnown RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 PAFAH1B1P43034 410 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 KIR3DL1P43629 444 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 KCNC1P48547 511 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 TAS2R39P59534 338 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 CALCOCO2Q13137 446 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 MYBPHQ13203 477 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 FRG1Q14331 258 aaKnown RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 ZNF460Q14592 562 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 PDK4Q16654 411 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 CMPK2Q5EBM0 449 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 NCCRP1Q6ZVX7 275 aaPredicted RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 ACAD11Q709F0 780 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms