RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SORCS2Q96PQ0 1159 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 ADAM30Q9UKF2 790 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 MAB21L2Q9Y586 359 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 SNX11Q9Y5W9 270 aa7.15□□□□□ -1.26
CPSF6-202ENST00000435070 IQCMA0A1B0GVH7 501 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 WNT10BO00744 389 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 STOMP27105 288 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 RPS7P62081 194 aaKnown RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 C1DQ13901 141 aaKnown RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 FGL2Q14314 439 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 ALFQ53S48 1182 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 CLLU1Q5K131 121 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 IL20RBQ6UXL0 311 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 SHFQ7M4L6 423 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 FAM9CQ8IZT9 166 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 OR2T35Q8NGX2 323 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 CXorf58Q96LI9 332 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 KATNB1Q9BVA0 655 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 TAPBPLQ9BX59 468 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 GABARAPL3Q9BY60 117 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 TBC1D17Q9HA65 648 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 TNFRSF10DQ9UBN6 386 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 GTF2A1LQ9UNN4 478 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 TLR6Q9Y2C9 796 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 PROM1O43490 865 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 SSNA1O43805 119 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 LANCL1O43813 399 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 POU3F2P20265 443 aaPredicted RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 VIPR1P32241 457 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 RPL34P49207 117 aaKnown RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 SRP9P49458 86 aaKnown RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 SSTP61278 116 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 RPS25P62851 125 aaKnown RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 HSF2Q03933 536 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 TWF1Q12792 350 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 OCLNQ16625 522 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 ATP13A5Q4VNC0 1218 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 NBPF12Q5TAG4 269 aaPredicted RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 CBLL1Q75N03 491 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 TCEANCQ8N8B7 351 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 ZSWIM3Q96MP5 696 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 SPRTNQ9H040 489 aaPredicted RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 ARNT2Q9HBZ2 717 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 HCN2Q9UL51 889 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 UBR3Q6ZT12 1888 aa7.15□□□□□ -1.27
CPSF6-202ENST00000435070 COL11A2P13942 1736 aaPredicted RBP7.15□□□□□ -1.27
CPSF6-202ENST00000435070 SLC30A4O14863 429 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 FFAR2O15552 330 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 DHFRP00374 187 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 MMP2P08253 660 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 ATXN1LP0C7T5 689 aaKnown RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 KIR3DL1P43629 444 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 DEFA5Q01523 94 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 GPR176Q14439 515 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 ADGRG3Q86Y34 549 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 PTOV1Q86YD1 416 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 OR52E4Q8NGH9 312 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 OR8D4Q8NGM9 314 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 C7orf34Q96L11 122 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 C12orf66Q96MD2 445 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 KCTD7Q96MP8 289 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 CDCA4Q9BXL8 241 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 POLMQ9NP87 494 aaPredicted RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 UBQLN1Q9UMX0 589 aaKnown RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 NDUFA2O43678 99 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 TSPAN12O95859 305 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 GABRB1P18505 474 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 SUOXP51687 545 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 SLC16A1P53985 500 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 AIF1P55008 147 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 SREBF2Q12772 1141 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 GPR155Q7Z3F1 870 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 IFNL1Q8IU54 200 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 GATAD2BQ8WXI9 593 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 TM9SF4Q92544 642 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 MYLPFQ96A32 169 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 MS4A3Q96HJ5 214 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 SLC29A3Q9BZD2 475 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 RANBP3Q9H6Z4 567 aaPredicted RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 TRPM5Q9NZQ8 1165 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 NDUFAF4Q9P032 175 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 FKBPLQ9UIM3 349 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 FBXL2Q9UKC9 423 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 PADI2Q9Y2J8 665 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 DICER1Q9UPY3 1922 aaKnown RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 C2orf92A0A1B0GVN3 265 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 HYKKA2RU49 373 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 TRIM3O75382 744 aaPredicted RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 CBX7O95931 251 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 DRD5P21918 477 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 MRPL19P49406 292 aaKnown RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 ALKAL2Q6UX46 152 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 FAM83AQ86UY5 434 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 KLHL6Q8WZ60 621 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 PIGKQ92643 395 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 LATS2Q9NRM7 1088 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 HPF1Q9NWY4 346 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 POFUT2Q9Y2G5 429 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 CDH10Q9Y6N8 788 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 SLC22A23A1A5C7 686 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms