RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SELENOMQ8WWX9 145 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 PSMF1Q92530 271 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 GATA5Q9BWX5 397 aaPredicted RBP17.24■□□□□ 0.35
HLA-F-220ENST00000434407 ADAM29Q9UKF5 820 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 G3BP2Q9UN86 482 aaKnown RBP17.24■□□□□ 0.35
HLA-F-220ENST00000434407 MRPS33Q9Y291 106 aaKnown RBP17.24■□□□□ 0.35
HLA-F-220ENST00000434407 RP1L1Q8IWN7 2480 aaPredicted RBP17.23■□□□□ 0.35
HLA-F-220ENST00000434407 CLDN4O14493 209 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 TMPRSS11DO60235 418 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 CTNSO60931 367 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 NFATC3Q12968 1075 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 RAPSNQ13702 412 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 SGO1Q5FBB7 561 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 CFAP157Q5JU67 520 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 TCHHL1Q5QJ38 904 aaPredicted RBP17.23■□□□□ 0.35
HLA-F-220ENST00000434407 IGFL2Q6UWQ7 119 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 IGFL3Q6UXB1 125 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 FAM47BQ8NA70 645 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 THOC3Q96J01 351 aaKnown RBP17.23■□□□□ 0.35
HLA-F-220ENST00000434407 CNDP1Q96KN2 507 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 TRMOQ9BU70 441 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 PRM3Q9NNZ6 103 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 MID1IP1Q9NPA3 183 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 PRTFDC1Q9NRG1 225 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 MS4A12Q9NXJ0 267 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 ASB4Q9Y574 426 aa17.23■□□□□ 0.35
HLA-F-220ENST00000434407 SYNDIG1LA6NDD5 238 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 B8ZZF3 427 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 ULK1O75385 1050 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 SEC24DO94855 1032 aaPredicted RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 HMOX2P30519 316 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 FOXA1P55317 472 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 HNRNPH2P55795 449 aaKnown RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 OR4D2P58180 307 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 AP2B1P63010 937 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 GALNT1Q10472 559 aaPredicted RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 TBL3Q12788 808 aaKnown RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 ASPHQ12797 758 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 CSTF3Q12996 717 aaKnown RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 JMJD6Q6NYC1 403 aaPredicted RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 PAPD4Q6PIY7 484 aaKnown RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 GPR180Q86V85 440 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 NUDT13Q86X67 352 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 AMER2Q8N7J2 671 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 OR6Y1Q8NGX8 325 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 M1APQ8TC57 530 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 KCNA7Q96RP8 456 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 LPAR4Q99677 370 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 MECRQ9BV79 373 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 MRPL1Q9BYD6 325 aaKnown RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 TNFRSF12AQ9NP84 129 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 LYARQ9NX58 379 aaKnown RBP17.22■□□□□ 0.35
HLA-F-220ENST00000434407 AHSPQ9NZD4 102 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 PHF11Q9UIL8 331 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 FBXW2Q9UKT8 454 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 SLC12A4Q9UP95 1085 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 ATG4BQ9Y4P1 393 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 SPACA6W5XKT8 324 aa17.22■□□□□ 0.35
HLA-F-220ENST00000434407 PROM1O43490 865 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 NPHS1O60500 1241 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 ALPPP05187 535 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 BPGMP07738 259 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 CELA2AP08217 269 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 ITGAMP11215 1152 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 CPN2P22792 545 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 TPP2P29144 1249 aaPredicted RBP17.21■□□□□ 0.35
HLA-F-220ENST00000434407 SOX11P35716 441 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 HTR6P50406 440 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 ACTN3Q08043 901 aaPredicted RBP17.21■□□□□ 0.35
HLA-F-220ENST00000434407 C19orf57Q0VDD7 668 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 TERF2Q15554 542 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 EXT1Q16394 746 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 AGAP7PQ5VUJ5 663 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 H3F3CQ6NXT2 135 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 PAGE2Q7Z2X7 111 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 GBP7Q8N8V2 638 aaPredicted RBP17.21■□□□□ 0.35
HLA-F-220ENST00000434407 NFAM1Q8NET5 270 aaPredicted RBP17.21■□□□□ 0.35
HLA-F-220ENST00000434407 CHTF18Q8WVB6 975 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 AGAP4Q96P64 663 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 ACPTQ9BZG2 426 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 MMP25Q9NPA2 562 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 NMRK1Q9NWW6 199 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 VPS29Q9UBQ0 182 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 PPIEQ9UNP9 301 aaKnown RBP17.21■□□□□ 0.35
HLA-F-220ENST00000434407 TIMM22Q9Y584 194 aa17.21■□□□□ 0.35
HLA-F-220ENST00000434407 HELZ2Q9BYK8 2649 aaKnown RBP17.21■□□□□ 0.35
HLA-F-220ENST00000434407 UQCRHLA0A096LP55 91 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 SAGE2PA6NJ88 616 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 SUV39H1O43463 412 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 UQCRHP07919 91 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 FAM58BPP0C7Q3 252 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 DHRS4L1P0CG22 281 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 CHN1P15882 459 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 SLC26A5P58743 744 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 IGLV3-21P80748 117 aaPredicted RBP17.2■□□□□ 0.34
HLA-F-220ENST00000434407 TNFRSF17Q02223 184 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 KLRB1Q12918 225 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 SLC13A2Q13183 592 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 CASP8Q14790 479 aa17.2■□□□□ 0.34
HLA-F-220ENST00000434407 IRAK1BP1Q5VVH5 260 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms