RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CGB2Q6NT52 195 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 MRPL14Q6P1L8 145 aaKnown RBP14.47□□□□□ -0.09
CNOT9-205ENST00000433439 UNQ6494/PRO21346Q6UXR6 183 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 ZNF517Q6ZMY9 492 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-205ENST00000433439 LARP4Q71RC2 724 aaKnown RBP eCLIP14.47□□□□□ -0.09
CNOT9-205ENST00000433439 CLNKQ7Z7G1 428 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 LAPTM4BQ86VI4 370 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 MMP21Q8N119 569 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 LIX1Q8N485 282 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 ZNF248Q8NDW4 579 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 UCN3Q969E3 161 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 GFM2Q969S9 779 aaKnown RBP14.47□□□□□ -0.09
CNOT9-205ENST00000433439 TM4SF18Q96CE8 201 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 MARK4Q96L34 752 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 RILPQ96NA2 401 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 NSRP1Q9H0G5 558 aaKnown RBP14.47□□□□□ -0.09
CNOT9-205ENST00000433439 WDR41Q9HAD4 459 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 CLK4Q9HAZ1 481 aaKnown RBP14.47□□□□□ -0.09
CNOT9-205ENST00000433439 KCMF1Q9P0J7 381 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 IL17BQ9UHF5 180 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 MKL2Q9ULH7 1088 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 PADI2Q9Y2J8 665 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 TMED5Q9Y3A6 229 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 ASB4Q9Y574 426 aa14.47□□□□□ -0.09
CNOT9-205ENST00000433439 CHD8Q9HCK8 2581 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 CHD6Q8TD26 2715 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 E9PBE3 544 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 NPIPB8E9PQR5 432 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 AKAP10O43572 662 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 KLHL41O60662 606 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 AIFM1O95831 613 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 ALBP02768 609 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 HEXBP07686 556 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 RAB40ALP0C0E4 278 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 NR2F6P10588 404 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 BCKDHAP12694 445 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 LIFP15018 202 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 ALOX15P16050 662 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 SDC1P18827 310 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 JAK1P23458 1154 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 TACR1P25103 407 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 HNRNPFP52597 415 aaKnown RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 ERVK-8P63133 956 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 BTG2P78543 158 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 MC1RQ01726 317 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 TNFRSF17Q02223 184 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 ID2Q02363 134 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 EMX2Q04743 252 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 KLC1Q07866 573 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 ZNF763Q0D2J5 394 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 C2orf80Q0P641 193 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 SLC13A2Q13183 592 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 MAD2L1Q13257 205 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 LSM12Q3MHD2 195 aaKnown RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 TMEM198Q66K66 360 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 GALNT18Q6P9A2 607 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 CPLX4Q7Z7G2 160 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 TMEM132CQ8N3T6 1108 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 TMEM52Q8NDY8 209 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 CEP70Q8NHQ1 597 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 ADAMTS18Q8TE60 1221 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 C11orf24Q96F05 449 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 METTL2AQ96IZ6 378 aaKnown RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 EGLN2Q96KS0 407 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 ELAC2Q9BQ52 826 aaKnown RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 CRB3Q9BUF7 120 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 FAIM2Q9BWQ8 316 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 TMEM120AQ9BXJ8 343 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 TMEM121BQ9BXQ6 578 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 ACTL8Q9H568 366 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 TCF7L2Q9NQB0 619 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 PRTFDC1Q9NRG1 225 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 C14orf105Q9NVL8 296 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 SIRT5Q9NXA8 310 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 MS4A12Q9NXJ0 267 aa14.46□□□□□ -0.09
CNOT9-205ENST00000433439 NOP53Q9NZM5 478 aaKnown RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 NXT1Q9UKK6 140 aaKnown RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 MRPS33Q9Y291 106 aaKnown RBP14.46□□□□□ -0.09
CNOT9-205ENST00000433439 CCDC88CQ9P219 2028 aa14.46□□□□□ -0.1
CNOT9-205ENST00000433439 VSTM2BA6NLU5 285 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 WASHC1A8K0Z3 465 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 C21orf140B9A014 251 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 CYR61O00622 381 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 CLDN4O14493 209 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 PROM1O43490 865 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 LDB3O75112 727 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 PRR35P0CG20 571 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 G6PDP11413 515 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 PTPN4P29074 926 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 OTX2P32243 289 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 ARFIP2P53365 341 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 EMP2P54851 167 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 DIO3P55073 304 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 NME5P56597 212 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 TUBB8Q3ZCM7 444 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 NDUFAF5Q5TEU4 345 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 OR4N5Q8IXE1 308 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 SNIP1Q8TAD8 396 aaKnown RBP14.45□□□□□ -0.1
CNOT9-205ENST00000433439 ACTRT2Q8TDY3 377 aa14.45□□□□□ -0.1
CNOT9-205ENST00000433439 SLC45A3Q96JT2 553 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms