RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ACOT4Q8N9L9 421 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 L3MBTL4Q8NA19 623 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PLPP5Q8NEB5 264 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CATSPER1Q8NEC5 780 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 DNAJB14Q8TBM8 379 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 WDR20Q8TBZ3 569 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 BRIX1Q8TDN6 353 aaKnown RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 DOK4Q8TEW6 326 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 GAL3ST3Q96A11 431 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 RGMAQ96B86 450 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 NACC2Q96BF6 587 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF775Q96BV0 537 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 REPS1Q96D71 796 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TMEM237Q96Q45 408 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 SERINC2Q96SA4 455 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 CSF3RQ99062 836 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 HBEGFQ99075 208 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TBCDQ9BTW9 1192 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TUBB6Q9BUF5 446 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 NTMT1Q9BV86 223 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 NPLQ9BXD5 320 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ERVK-6Q9BXR3 956 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ROPN1BQ9BZX4 212 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TRIM4Q9C037 500 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 LHPPQ9H008 270 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 IQCGQ9H095 443 aaKnown RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ELOVL6Q9H5J4 265 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ROPN1Q9HAT0 212 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 KCNK13Q9HB14 408 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 MID1IP1Q9NPA3 183 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PRTFDC1Q9NRG1 225 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PNO1Q9NRX1 252 aaKnown RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 LANCL2Q9NS86 450 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 STMN3Q9NZ72 180 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 COPG2Q9UBF2 871 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 C19orf25Q9UFG5 118 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 ADGRE2Q9UHX3 823 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TUBD1Q9UJT1 453 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 RAB21Q9UL25 225 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 DAPP1Q9UN19 280 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 TIMM22Q9Y584 194 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 DOCK10Q96BY6 2186 aa5.42□□□□□ -1.54
HMGB3P24-201ENST00000433260 PTPRQQ9UMZ3 2332 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 WDFY3Q8IZQ1 3526 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 LOC102723996A0A087X1L8 192 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 A0A088AWK7 358 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 WDR91A4D1P6 747 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 GLOD5A6NK44 160 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 CLDN4O14493 209 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PLPP1O14494 284 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 UBFD1O14562 309 aaKnown RBP5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PLIN3O60664 434 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 DPM1O60762 260 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 CTNSO60931 367 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 EEDO75530 441 aaKnown RBP5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PRKRAO75569 313 aaKnown RBP5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 OTCP00480 354 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PROCP04070 461 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 KLK1P06870 262 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 NUDT17P0C025 328 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PRR35P0CG20 571 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 ITGAMP11215 1152 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 ICAM2P13598 275 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF10P21506 573 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 HIST1H1TP22492 207 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 GSTM2P28161 218 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PPP2R1BP30154 601 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 HMOX2P30519 316 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 SERPINB1P30740 379 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 HPDP32754 393 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 SOX18P35713 384 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PIK3CBP42338 1070 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 CD97P48960 835 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PRKAA2P54646 552 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 NAGLUP54802 743 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 SOX8P57073 446 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 ID2Q02363 134 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLC18A2Q05940 514 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF33BQ06732 778 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF844Q08AG5 666 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 STX4Q12846 297 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 IFT88Q13099 833 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 TRAF3Q13114 568 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 E2F2Q14209 437 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 MYBPC3Q14896 1274 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 IGFBP7Q16270 282 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 KRT71Q3SY84 523 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 TMEM35AQ53FP2 167 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 CFAP157Q5JU67 520 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 CCNYL2Q5T2Q4 361 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 AGAP7PQ5VUJ5 663 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 FRG2Q64ET8 278 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 C18orf63Q68DL7 685 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 JMJD6Q6NYC1 403 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 LETMD1Q6P1Q0 360 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 PAPD4Q6PIY7 484 aaKnown RBP5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 CYP20A1Q6UW02 462 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 TREML4Q6UXN2 200 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZYG11AQ6WRX3 759 aa5.41□□□□□ -1.54
HMGB3P24-201ENST00000433260 DNAJC14Q6Y2X3 702 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms