RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 RILPQ96NA2 401 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 MAPKAP1Q9BPZ7 522 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 EBF4Q9BQW3 602 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 RBCK1Q9BYM8 510 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 TGIF2Q9GZN2 237 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 EPN3Q9H201 632 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 WDR55Q9H6Y2 383 aaPredicted RBP10.39□□□□□ -0.75
CHD4-202ENST00000430771 MIEF1Q9NQG6 463 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 PRDM9Q9NQV7 894 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 CTSFQ9UBX1 484 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 KCND3Q9UK17 655 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 CROTQ9UKG9 612 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 DLGAP4Q9Y2H0 992 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 MMACHCQ9Y4U1 282 aa10.39□□□□□ -0.75
CHD4-202ENST00000430771 E9PBE3 544 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 CLDN4O14493 209 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 UBDO15205 165 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 KLHL41O60662 606 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 IL3P08700 152 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 BCKDHAP12694 445 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 TCN2P20062 427 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 DLSTP36957 453 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 FOLR3P41439 243 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 TAS2R50P59544 299 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 GSTA3Q16772 222 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 MINDY4Q4G0A6 757 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 NDUFAF5Q5TEU4 345 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 IL23RQ5VWK5 629 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 MRPL14Q6P1L8 145 aaKnown RBP10.38□□□□□ -0.75
CHD4-202ENST00000430771 QSOX2Q6ZRP7 698 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 LIX1Q8N485 282 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 ENDOVQ8N8Q3 282 aaKnown RBP10.38□□□□□ -0.75
CHD4-202ENST00000430771 STT3BQ8TCJ2 826 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 C16orf78Q8WTQ4 265 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 FGF11Q92914 225 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 NKD1Q969G9 470 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 TSSK3Q96PN8 268 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 OR52B2Q96RD2 323 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 CSF3RQ99062 836 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 GPR87Q9BY21 358 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 CCDC86Q9H6F5 360 aaKnown RBP10.38□□□□□ -0.75
CHD4-202ENST00000430771 GPN2Q9H9Y4 310 aaPredicted RBP10.38□□□□□ -0.75
CHD4-202ENST00000430771 PRTFDC1Q9NRG1 225 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 SLC22A11Q9NSA0 550 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 GIMAP4Q9NUV9 329 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 AIG1Q9NVV5 245 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 TEX10Q9NXF1 929 aaPredicted RBP10.38□□□□□ -0.75
CHD4-202ENST00000430771 ASB4Q9Y574 426 aa10.38□□□□□ -0.75
CHD4-202ENST00000430771 NCOR2Q9Y618 2525 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 VSTM2BA6NLU5 285 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 PCDH17O14917 1159 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 PROM1O43490 865 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 PRMT3O60678 531 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 CDC123O75794 336 aaPredicted RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 BMP10O95393 424 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 IGHEP01854 428 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 ALDOCP09972 364 aaKnown RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 ZGLP1P0C6A0 271 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 G6PDP11413 515 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 DRD2P14416 443 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 DDCP20711 480 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 DRD4P21917 467 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 ALDH9A1P49189 494 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 CLNS1AP54105 237 aaKnown RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 HSD17B7P56937 341 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 SQLEQ14534 574 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 RPS6KA2Q15349 733 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 NKG7Q16617 165 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 PDCD4Q53EL6 469 aaKnown RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 LCN10Q6JVE6 187 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 FAM199XQ6PEV8 388 aaPredicted RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 MED25Q71SY5 747 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 R3HCC1LQ7Z5L2 792 aaKnown RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 OR2Y1Q8NGV0 311 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 C10orf82Q8WW14 230 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 GATA6Q92908 595 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 TM4SF18Q96CE8 201 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 ZNF764Q96H86 408 aaPredicted RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 SPSB2Q99619 263 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 CRB3Q9BUF7 120 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 BRINP2Q9C0B6 783 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 SOX17Q9H6I2 414 aaPredicted RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 RPF2Q9H7B2 306 aaKnown RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 WDR70Q9NW82 654 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 EHD3Q9NZN3 535 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 KCMF1Q9P0J7 381 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 C19orf25Q9UFG5 118 aaPredicted RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 ENTPD4Q9Y227 616 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 PTRH2Q9Y3E5 179 aaKnown RBP10.37□□□□□ -0.75
CHD4-202ENST00000430771 ATG4BQ9Y4P1 393 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 PCDHGA6Q9Y5G7 932 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 PCDHA9Q9Y5H5 950 aa10.37□□□□□ -0.75
CHD4-202ENST00000430771 LOC101059948A0A1B0GTJ6 334 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 A0A1W2PR48 441 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 MED19A0JLT2 244 aaPredicted RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 CYR61O00622 381 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 SCAMP2O15127 329 aaKnown RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 SNX3O60493 162 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 B4GALT2O60909 372 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 FAM107AO95990 144 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms