RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 ICKQ9UPZ9 632 aa9.5□□□□□ -0.89
ATG4B-212ENST00000430617 STK38LQ9Y2H1 464 aa9.5□□□□□ -0.89
ATG4B-212ENST00000430617 HEBP2Q9Y5Z4 205 aa9.5□□□□□ -0.89
ATG4B-212ENST00000430617 USH1CQ9Y6N9 552 aa9.5□□□□□ -0.89
ATG4B-212ENST00000430617 HIVEP2P31629 2446 aa9.5□□□□□ -0.89
ATG4B-212ENST00000430617 ZNF407Q9C0G0 2248 aa9.5□□□□□ -0.89
ATG4B-212ENST00000430617 KCNE1BA0A087WTH5 132 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 A0A1W2PPV9 198 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 E7ENX8 843 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 MATN2O00339 956 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 CCNT2O60583 730 aaKnown RBP9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PRAMEF4O60810 478 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 OR2B3O76000 313 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 ESRRBO95718 433 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 FGF4P08620 206 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 SOX11P35716 441 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 GABRA4P48169 554 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 RPL14P50914 215 aaKnown RBP9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PNLIPRP1P54315 467 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 FOXA1P55317 472 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 TAP2Q03519 686 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PCDH1Q08174 1060 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 DSG2Q14126 1118 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 FASTKQ14296 549 aaKnown RBP9.49□□□□□ -0.89
ATG4B-212ENST00000430617 UGT3A2Q3SY77 523 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 GGTA1PQ4G0N0 100 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 GKAP1Q5VSY0 366 aaPredicted RBP9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PRAMEF9Q5VWM5 478 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 LETMD1Q6P1Q0 360 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 GPRIN3Q6ZVF9 776 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 DOLPP1Q86YN1 238 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 GPR135Q8IZ08 494 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 KIRREL3Q8IZU9 778 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 SIRT6Q8N6T7 355 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 ZNF655Q8N720 491 aaPredicted RBP9.49□□□□□ -0.89
ATG4B-212ENST00000430617 LINC01555Q8NAE3 123 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PPFIBP2Q8ND30 876 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PHC3Q8NDX5 983 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 OR52E1Q8NGJ3 308 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PROKR1Q8TCW9 393 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 AGR3Q8TD06 166 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PHF10Q8WUB8 498 aaKnown RBP9.49□□□□□ -0.89
ATG4B-212ENST00000430617 ZFPM2Q8WW38 1151 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 PYCR2Q96C36 320 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 THOC1Q96FV9 657 aaKnown RBP9.49□□□□□ -0.89
ATG4B-212ENST00000430617 SPSB2Q99619 263 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 RAB11FIP5Q9BXF6 653 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 SHCBP1LQ9BZQ2 653 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 UCK2Q9BZX2 261 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.49□□□□□ -0.891e-8■□□□□ 10
ATG4B-212ENST00000430617 ATG10Q9H0Y0 220 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 NOL11Q9H8H0 719 aaKnown RBP9.49□□□□□ -0.89
ATG4B-212ENST00000430617 ZNF160Q9HCG1 818 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 MID1IP1Q9NPA3 183 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 DNAJC11Q9NVH1 559 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 POLG2Q9UHN1 485 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 SH2B3Q9UQQ2 575 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 ARHGAP21Q5T5U3 1957 aa9.49□□□□□ -0.89
ATG4B-212ENST00000430617 GSAPA4D1B5 854 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 BTN3A3O00478 584 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 AZIN1O14977 448 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 HDAC3O15379 428 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 CTAG2O75638 210 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 TOXO94900 526 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 WDPCPO95876 746 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 OTCP00480 354 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 ENO1P06733 434 aaKnown RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 KITP10721 976 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 EPB42P16452 691 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 NDUFS1P28331 727 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 MSX1P28360 303 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 PEBP1P30086 187 aaKnown RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 HSD17B2P37059 387 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 RAB28P51157 221 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 MYBPHQ13203 477 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 PRKG2Q13237 762 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 NAE1Q13564 534 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 ZIC1Q15915 447 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 RBBP7Q16576 425 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 NKG7Q16617 165 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 CLEC6AQ6EIG7 209 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 CAPN13Q6MZZ7 669 aaPredicted RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 RNF165Q6ZSG1 346 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 THOC6Q86W42 341 aaKnown RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 KRTAP1-3Q8IUG1 177 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 WDR75Q8IWA0 830 aaKnown RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 CHERPQ8IWX8 916 aaKnown RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 MARVELD2Q8N4S9 558 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 LMNTD1Q8N9Z9 388 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 OR4F6Q8NGB9 312 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 OR2L8Q8NGY9 312 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 BRIX1Q8TDN6 353 aaKnown RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 THAP3Q8WTV1 239 aaPredicted RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 SEC16BQ96JE7 1060 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 MAELQ96JY0 434 aaKnown RBP9.48□□□□□ -0.89
ATG4B-212ENST00000430617 FAR2Q96K12 515 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 GPR137Q96N19 417 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 CDK15Q96Q40 435 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 FERD3LQ96RJ6 166 aa9.48□□□□□ -0.89
ATG4B-212ENST00000430617 KCNA7Q96RP8 456 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms