RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 FAM180BQ6P0A1 224 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 PAPD4Q6PIY7 484 aaKnown RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 CPEB2Q7Z5Q1 589 aaKnown RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 TREML1Q86YW5 311 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 LAS2Q8IYD9 372 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 CISD2Q8N5K1 135 aaKnown RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 OR2L5Q8NG80 312 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 OR4F6Q8NGB9 312 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 WDR20Q8TBZ3 569 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 TRPC4APQ8TEL6 797 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 ZNF483Q8TF39 744 aaPredicted RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 THAP3Q8WTV1 239 aaPredicted RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 GAL3ST3Q96A11 431 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 TBC1D20Q96BZ9 403 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 CNDP1Q96KN2 507 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 PTCHD1Q96NR3 888 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 EFCAB11Q9BUY7 163 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 REXO4Q9GZR2 422 aaKnown RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 ACTR8Q9H981 624 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 DMRT3Q9NQL9 472 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 C14orf105Q9NVL8 296 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 GPRC5BQ9NZH0 403 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 KCMF1Q9P0J7 381 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 PSMC3IPQ9P2W1 217 aaPredicted RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 NXT1Q9UKK6 140 aaKnown RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 FBXW2Q9UKT8 454 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 CDC14AQ9UNH5 594 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 PCDHGA9Q9Y5G4 932 aaKnown RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 HEMK1Q9Y5R4 338 aaPredicted RBP6.19□□□□□ -1.42
SMC6-205ENST00000430591 PTGDR2Q9Y5Y4 395 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 IKBKGQ9Y6K9 419 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 HIVEP3Q5T1R4 2406 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 NCKAP5O14513 1909 aa6.19□□□□□ -1.42
SMC6-205ENST00000430591 UBR5O95071 2799 aaPredicted RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 CROCCQ5TZA2 2017 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 COL12A1Q99715 3063 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 CCDC189A1A4V9 331 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ANKDD1BA6NHY2 528 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 A8MUI8 341 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 J3QKU1 62 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 CYR61O00622 381 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 TXNDC9O14530 226 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 FGF17O60258 216 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ZNF354AO60765 605 aaPredicted RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 H2AFYO75367 372 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 SPAG7O75391 227 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 NME6O75414 186 aaPredicted RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 CLEC3AO75596 197 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 KRT38O76015 456 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 IPO13O94829 963 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 SLU7O95391 586 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 WDPCPO95876 746 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 RNH1P13489 461 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 GNLYP22749 145 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ATP5A1P25705 553 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 SERPINB3P29508 390 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ARRB2P32121 409 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 BSGP35613 385 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ARL1P40616 181 aaPredicted RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 RRADP55042 308 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 RAB38P57729 211 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 OR4D2P58180 307 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 SLC26A5P58743 744 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 PMP22Q01453 160 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 DUSP2Q05923 314 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 AIMP2Q13155 320 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 NSDHLQ15738 373 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 TBCCQ15814 346 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 BTBD16Q32M84 506 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 CRB2Q5IJ48 1285 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ZNF678Q5SXM1 525 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 VWA5B1Q5TIE3 1220 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 KHDRBS2Q5VWX1 349 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 HIST2H2BCQ6DN03 193 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 MED27Q6P2C8 311 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 TIFABQ6ZNK6 161 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ABHD13Q7L211 337 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 NDUFAF7Q7L592 441 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ZNF227Q86WZ6 799 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 CRLF3Q8IUI8 442 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 SCUBE1Q8IWY4 988 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 BEST3Q8N1M1 668 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 KRT78Q8N1N4 520 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 TCAIMQ8N3R3 496 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ACOT4Q8N9L9 421 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 TEX19Q8NA77 164 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 NFAM1Q8NET5 270 aaPredicted RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 TRPV3Q8NET8 790 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 MIB2Q96AX9 1013 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 ANKRD9Q96BM1 317 aaPredicted RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 PPWD1Q96BP3 646 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 SNRNP40Q96DI7 357 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 FER1L6-AS2Q96M78 137 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 SIGLEC12Q96PQ1 595 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 MECRQ9BV79 373 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 MRPL1Q9BYD6 325 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 PARD6BQ9BYG5 372 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 LHPPQ9H008 270 aa6.18□□□□□ -1.42
SMC6-205ENST00000430591 MRPL46Q9H2W6 279 aaKnown RBP6.18□□□□□ -1.42
SMC6-205ENST00000430591 EHD1Q9H4M9 534 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms