RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 IDNKQ5T6J7 187 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 ZNF730Q6ZMV8 503 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 DENND6BQ8NEG7 585 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 AP3S1Q92572 193 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 NEIL2Q969S2 332 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 TXNDC15Q96J42 360 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 FCRL4Q96PJ5 515 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 TM9SF2Q99805 663 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 TRMT61BQ9BVS5 477 aaKnown RBP13.16□□□□□ -0.3
SGMS1-203ENST00000429490 ERVW-1Q9UQF0 538 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 SLC45A1Q9Y2W3 748 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
SGMS1-203ENST00000429490 ISM1B1AKI9 464 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 PRR23D1E9PI22 279 aaPredicted RBP13.16□□□□□ -0.3
SGMS1-203ENST00000429490 AOC2O75106 756 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 GASTP01350 101 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 CYP17A1P05093 508 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 PRR23D2P0DMB1 279 aaPredicted RBP13.16□□□□□ -0.3
SGMS1-203ENST00000429490 JUNDP17535 347 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 CHMP24386 653 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 SDC2P34741 201 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 SSR2P43308 183 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 SLAMF1Q13291 335 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 SPIN4Q56A73 249 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 PLAG1Q6DJT9 500 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 PAQR6Q6TCH4 344 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 IQCHQ86VS3 1027 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 PTOV1Q86YD1 416 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 MARCH9Q86YJ5 346 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 NPAS4Q8IUM7 802 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 C11orf24Q96F05 449 aaPredicted RBP13.16□□□□□ -0.3
SGMS1-203ENST00000429490 ZFP3Q96NJ6 502 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 CLEC4EQ9ULY5 219 aa13.16□□□□□ -0.3
SGMS1-203ENST00000429490 PRAMEF33A0A0G2JMD5 474 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 PRAMEF10O60809 474 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 GPX2P18283 190 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 BTBD16Q32M84 506 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 LRIF1Q5T3J3 769 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 OR2G6Q5TZ20 316 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 C22orf39Q6P5X5 142 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 WDR48Q8TAF3 677 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 SLC38A2Q96QD8 506 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 TMEM184CQ9NVA4 438 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 OSGIN1Q9UJX0 560 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 ANKRD34BA5PLL1 514 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 FAM172BPA6NC97 362 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 IL7P13232 177 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 DDX5P17844 614 aaKnown RBP13.15□□□□□ -0.3
SGMS1-203ENST00000429490 PDHA2P29803 388 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 RPS19P39019 145 aaKnown RBP13.15□□□□□ -0.3
SGMS1-203ENST00000429490 CSNK1DP48730 415 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 RNF144AP50876 292 aaPredicted RBP13.15□□□□□ -0.3
SGMS1-203ENST00000429490 VEZF1Q14119 521 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 REEP3Q6NUK4 255 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 TMIGD1Q6UXZ0 262 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 CCDC149Q6ZUS6 474 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 KRT78Q8N1N4 520 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 SLC43A3Q8NBI5 491 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 ZNF740Q8NDX6 193 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 ATP6V1C2Q8NEY4 427 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 ASB11Q8WXH4 323 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 EPYCQ99645 322 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 SEC14L4Q9UDX3 406 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 SLC6A14Q9UN76 642 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 F5P12259 2224 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 TRAV6A0A075B6T7 132 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 TMEM202A6NGA9 273 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 SELPP16109 830 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 RPS3P23396 243 aaKnown RBP eCLIP13.15□□□□□ -0.3
SGMS1-203ENST00000429490 NOS3P29474 1203 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 AVPR1BP47901 424 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 DGKGP49619 791 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 DSC1Q08554 894 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 KIAA0040Q15053 153 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 C9orf64Q5T6V5 341 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 ZNF697Q5TEC3 545 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 LIPJQ5W064 366 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 C17orf64Q86WR6 236 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 POF1BQ8WVV4 589 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 MND1Q9BWT6 205 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 TTTY10Q9BZA0 68 aa13.15□□□□□ -0.3
SGMS1-203ENST00000429490 TRIM64A6NGJ6 449 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 CPSF4LA6NMK7 179 aaKnown RBP13.14□□□□□ -0.31
SGMS1-203ENST00000429490 M0R3H8 397 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 C8orf89P0DMQ9 161 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 PTX3P26022 381 aaPredicted RBP13.14□□□□□ -0.31
SGMS1-203ENST00000429490 SPINT3P49223 89 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 CTSCP53634 463 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 TBPL1P62380 186 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 EIF4EBP2Q13542 120 aaPredicted RBP13.14□□□□□ -0.31
SGMS1-203ENST00000429490 GDPD4Q6W3E5 623 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 VASH1Q7L8A9 365 aaPredicted RBP13.14□□□□□ -0.31
SGMS1-203ENST00000429490 Q8N402 240 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 SCRN2Q96FV2 425 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 HOXD1Q9GZZ0 328 aa13.14□□□□□ -0.31
SGMS1-203ENST00000429490 STOX2Q9P2F5 926 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms