RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 WRAP73Q9P2S5 460 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P5-201ENST00000428894 UXTQ9UBK9 157 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P5-201ENST00000428894 N6AMT1Q9Y5N5 214 aa4.28□□□□□ -1.72
HMGB3P5-201ENST00000428894 ZNF462Q96JM2 2506 aa4.28□□□□□ -1.72
HMGB3P5-201ENST00000428894 KIAA1549LQ6ZVL6 1849 aa4.28□□□□□ -1.72
HMGB3P5-201ENST00000428894 CABIN1Q9Y6J0 2220 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 A0A0J9YWU9 116 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 MTMR11A4FU01 709 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 USO1O60763 962 aaKnown RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 DEXIO95424 95 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 PRAMEF12O95522 483 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 HLA-EP13747 358 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 TRIM21P19474 475 aaKnown RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 TYMPP19971 482 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 PSMA4P25789 261 aaKnown RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 HSPA4P34932 840 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 EIF2DP41214 584 aaKnown RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 BMXP51813 675 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 CDH11P55287 796 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 KRTAP10-3P60369 221 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 MTF1Q14872 753 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 TAF1BQ53T94 588 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 TEX35Q5T0J7 233 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 ADAMTSL4-AS1Q5T5F5 129 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 TTC19Q6DKK2 380 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 BHLHB9Q6PI77 547 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 TRMT11Q7Z4G4 463 aaKnown RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 THEM5Q8N1Q8 247 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 ARL10Q8N8L6 244 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 L3MBTL4Q8NA19 623 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 DRAXINQ8NBI3 349 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 PCYOX1LQ8NBM8 494 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 SPPL2BQ8TCT7 592 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 RLN3Q8WXF3 142 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 N4BP2L2Q92802 583 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 HNRNPABQ99729 332 aaKnown RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 SLC39A3Q9BRY0 314 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 TCHPQ9BT92 498 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 UBXN6Q9BZV1 441 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 LSG1Q9H089 658 aaKnown RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 CXCL16Q9H2A7 254 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 TSPY26PQ9H489 355 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 ZNF71Q9NQZ8 489 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 COMMD8Q9NX08 183 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 UBAP1Q9NZ09 502 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 SEPT10Q9P0V9 454 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 PAK5Q9P286 719 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 ATMQ13315 3056 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 COL12A1Q99715 3063 aa4.27□□□□□ -1.73
HMGB3P5-201ENST00000428894 PTPRQQ9UMZ3 2332 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 PCDH15Q96QU1 1955 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 TRAV19A0A0A6YYK7 116 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 LIPT2A6NK58 231 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 TMEM110-MUSTN1A8MSY1 372 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 F8VZ95 297 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 H7C423 109 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 K7EQS6 105 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 SLC9A3R1O14745 358 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 FLRT2O43155 660 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 SLC37A4O43826 429 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 MTRF1O75570 445 aaKnown RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 TRMUO75648 421 aaKnown RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 GJB3O75712 270 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 SORBS2O94875 1100 aaKnown RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 TMEM63AO94886 807 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 REC8O95072 547 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 APODP05090 189 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 H1F0P07305 194 aaKnown RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 OR4Q2P0C623 313 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 FRMD6-AS1P0C7T7 363 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 CSH1P0DML2 217 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 CSH2P0DML3 217 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 MCF2P10911 925 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 ODC1P11926 461 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 ZNF24P17028 368 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 CDH2P19022 906 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 CYP11B2P19099 503 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 CYP3A5P20815 502 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 ZNF10P21506 573 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 IL4RP24394 825 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 U2AF2P26368 475 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 CEACAM8P31997 349 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 TNFRSF4P43489 277 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 OSTNP61366 133 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 PRKAA1Q13131 559 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 PCGF3Q3KNV8 242 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 GAGE2EQ4V326 116 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 CFAP58Q5T655 872 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 GKAP1Q5VSY0 366 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 KLC3Q6P597 504 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 METTL23Q86XA0 190 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 FBXL16Q8N461 479 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 DNAJC22Q8N4W6 341 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 ATAD1Q8NBU5 361 aa4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 PPHLN1Q8NEY8 458 aaKnown RBP4.26□□□□□ -1.73
HMGB3P5-201ENST00000428894 SPATA18Q8TC71 538 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms