RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CDH20Q9HBT6 801 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 TM9SF3Q9HD45 589 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ABLIM1O14639 778 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 TSPAN4O14817 238 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CAPN5O15484 640 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 RNGTTO60942 597 aaKnown RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 GSTT2P0CG29 244 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 RAC2P15153 192 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 TUBG1P23258 451 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 S100PP25815 95 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 IL1R2P27930 398 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 AFF1P51825 1210 aaKnown RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 PSPHP78330 225 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CREB5Q02930 508 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 KLF1Q13351 362 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 DAG1Q14118 895 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 LY6G5CQ5SRR4 150 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 FBXO46Q6PJ61 603 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 DCDC5Q6ZRR9 648 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 TRAM1L1Q8N609 369 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 AQP11Q8NBQ7 271 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 TMIEQ8NEW7 156 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CD300LFQ8TDQ1 290 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 BMFQ96LC9 184 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 SMOQ99835 787 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 URM1Q9BTM9 101 aaKnown RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CADM1Q9BY67 442 aaKnown RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF358Q9NW07 568 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 EXOSC1Q9Y3B2 195 aaKnown RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 HS3ST4Q9Y661 456 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ISPDA4D126 451 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 OR6C74A6NCV1 312 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ANKRD66B4E2M5 251 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 SLC22A1O15245 554 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 DFNA5O60443 496 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 HNRNPA1P09651 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 FXYD6P3P58550 94 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 OR2T5Q6IEZ7 315 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 PLXDC1Q8IUK5 500 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 GID4Q8IVV7 300 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 NPAS3Q8IXF0 933 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 RCBTB1Q8NDN9 531 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 OR2T29Q8NH02 315 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 MAP3K3Q99759 626 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 SMOC2Q9H3U7 446 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 DENND2DQ9H6A0 471 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 EPHA6Q9UF33 1036 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 PLCH1Q4KWH8 1693 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 AQP12BA6NM10 295 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF217O75362 1048 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 OR2B3O76000 313 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 MT-ND2P03891 347 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 UPP1Q16831 310 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF852Q6ZMS4 543 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 LANCL3Q6ZV70 420 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TTLL10Q6ZVT0 673 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 AQP12AQ8IXF9 295 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 POGLUT1Q8NBL1 392 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.6□□□□□ -1.035e-8■■■■□ 23.2
CTNND1-208ENST00000428599 HOXB13Q92826 284 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PHB2Q99623 299 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 RBCK1Q9BYM8 510 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 SMG9Q9H0W8 520 aaKnown RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PLEKHA3Q9HB20 300 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 DHDHQ9UQ10 334 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 NAV1Q8NEY1 1877 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TRPM3Q9HCF6 1732 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 HHLA1C9JL84 531 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PIRO00625 290 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PROM1O43490 865 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 SHOX2O60902 331 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 SOX30O94993 753 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 APOL3O95236 402 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 CSTAP01040 98 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 EBLN1P0CF75 366 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 GKN3PP0CG01 181 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 HOXD13P35453 343 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 HNF1BP35680 557 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 RBPJQ06330 500 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PLEKHS1Q5SXH7 462 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 FAM69BQ5VUD6 431 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 SLC39A5Q6ZMH5 540 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 GALNT15Q8N3T1 639 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 MFSD8Q8NHS3 518 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PLEKHO2Q8TD55 490 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 CASTOR1Q8WTX7 329 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TMEM80Q96HE8 168 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF641Q96N77 438 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ITPAQ9BY32 194 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 MROQ9BYG7 248 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 OR51B5Q9H339 312 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TAS2R10Q9NYW0 307 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 APOBEC3BQ9UH17 382 aaKnown RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 MYH1P12882 1939 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TTC24A2A3L6 582 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 SMAD9O15198 467 aaKnown RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 GPR32O75388 356 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PPM1BO75688 479 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 CYBAP13498 195 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 UQCRC2P22695 453 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms