RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CCDC160A6NGH7 325 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 NTN3O00634 580 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TSPAN4O14817 238 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 VILLO15195 856 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 LINC01565O15544 149 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ITM2AO43736 263 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 BCAS2O75934 225 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TSPAN9O75954 239 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 KLKB1P03952 638 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 LCKP06239 509 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CLTBP09497 229 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ZCCHC18P0CG32 403 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CCDC166P0CW27 439 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 NR2F1P10589 423 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ENO3P13929 434 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 STMN1P16949 149 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 VCLP18206 1134 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CYP2B6P20813 491 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 PTPN3P26045 913 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ADORA2BP29275 332 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TTKP33981 857 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CD151P48509 253 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 PSMD8P48556 350 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CLCN5P51795 746 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 GEMP55040 296 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 DNAJB13P59910 316 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 RAB10P61026 200 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 FOLH1Q04609 750 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ARHGAP1Q07960 439 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 FOXM1Q08050 763 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TRAP1Q12931 704 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 BNIP2Q12982 314 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CHAF1BQ13112 559 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 MSLNQ13421 630 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 APOFQ13790 326 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 SHBQ15464 509 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 C5orf22Q49AR2 442 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 SFT2D3Q587I9 215 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 PIGGQ5H8A4 983 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 Q5PR19 223 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 SAMD4BQ5PRF9 694 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 FAM171A1Q5VUB5 890 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 C9orf57Q5W0N0 161 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 KIAA0930Q6ICG6 404 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 FAM45BPQ6NSW5 357 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 UGT2A3Q6UWM9 527 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 HACD2Q6Y1H2 254 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 PID1Q7Z2X4 250 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 EFL1Q7Z2Z2 1120 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 BNIPLQ7Z465 357 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CTU1Q7Z7A3 348 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CMC1Q7Z7K0 106 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 FAM131BQ86XD5 332 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 LRRC49Q8IUZ0 686 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 KLHDC8BQ8IXV7 354 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 DSELQ8IZU8 1212 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 GPC2Q8N158 579 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CRYBG2Q8N1P7 616 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TMEM86AQ8N2M4 240 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CCDC185Q8N715 623 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 PACRGLQ8N7B6 248 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 DRAXINQ8NBI3 349 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 FAM81AQ8TBF8 368 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 FAM45AQ8TCE6 357 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ARNTL2Q8WYA1 636 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 IRGQQ8WZA9 623 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ROPN1LQ96C74 230 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 DGCR14Q96DF8 476 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CPB2Q96IY4 423 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 PRICKLE1Q96MT3 831 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CATSPER2Q96P56 530 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TEFMQ96QE5 360 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 YME1L1Q96TA2 773 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 NPY6RQ99463 290 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 NDNQ99608 321 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 HNRNPABQ99729 332 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 MRPL57Q9BQC6 102 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 MRPL45Q9BRJ2 306 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 SLC25A23Q9BV35 468 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 DUSP16Q9BY84 665 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 MRPL1Q9BYD6 325 aaKnown RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF385DQ9H6B1 395 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CATSPERBQ9H7T0 1116 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 MINDY3Q9H8M7 445 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF304Q9HCX3 659 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 CNGB3Q9NQW8 809 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 C20orf96Q9NUD7 363 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-202ENST00000427299 SLC38A7Q9NVC3 462 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TBC1D13Q9NVG8 400 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 MTMR10Q9NXD2 777 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TMEM216Q9P0N5 145 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 RIMS3Q9UJD0 308 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF711Q9Y462 761 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 PCDHGB1Q9Y5G3 927 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 MICAL3Q7RTP6 2002 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 TRBV5-7A0A0A0MS05 114 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ZCWPW2A0A1B0GU75 182 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 PRSS51A0A1B0GVH4 220 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms