RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 NOCTQ9UK39 431 aaKnown RBP13.92□□□□□ -0.18
PTPN13-203ENST00000427191 WDR45Q9Y484 360 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF821O75541 412 aaPredicted RBP13.92□□□□□ -0.18
PTPN13-203ENST00000427191 MAOAP21397 527 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 CLCNKBP51801 687 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 LINGO4Q6UY18 593 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 BIRC7Q96CA5 298 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 PARPBPQ9NWS1 579 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 MEGF6O75095 1541 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 BLOC1S5-TXNDC5H3BN57 136 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 EPOP01588 193 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 TAS2R20P59543 309 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ARHGAP40Q5TG30 622 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 DOHHQ9BU89 302 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ARL6Q9H0F7 186 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 CPNE5Q9HCH3 593 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 SLC2A4RGQ9NR83 387 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 CNTN5O94779 1100 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 VEGFCP49767 419 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF616Q08AN1 781 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF460Q14592 562 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 CDNFQ49AH0 187 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 KIAA0319Q5VV43 1072 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 SYNPOQ8N3V7 929 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 SLAIN1Q8ND83 568 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 FAM46BQ96A09 425 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 D6RAR5 112 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 H2BFMP0C1H6 154 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 THEGLP0DJG4 465 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 CHRNB2P17787 502 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 HOXA9P31269 272 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 RRNAD1Q96FB5 475 aaKnown RBP13.92□□□□□ -0.18
PTPN13-203ENST00000427191 TSGA13Q96PP4 275 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 RXFP3Q9NSD7 469 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF701Q9NV72 531 aaPredicted RBP13.92□□□□□ -0.18
PTPN13-203ENST00000427191 UCHL1P09936 223 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 PHOSPHO1Q8TCT1 267 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 ARNTL2Q8WYA1 636 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 BACE2Q9Y5Z0 518 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 CPQQ9Y646 472 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 UNC119BA6NIH7 251 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 PAHP00439 452 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 CHRM1P11229 460 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-203ENST00000427191 BRCC3P46736 316 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 FNTBP49356 437 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 ART1P52961 327 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 BEST4Q8NFU0 473 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 OR13C3Q8NGS6 347 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 TGM7Q96PF1 710 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 RAB19A4D1S5 217 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 M0R2N6 131 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 POU6F2P78424 691 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-203ENST00000427191 CMTM1Q8IZ96 169 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 OR8J1Q8NGP2 316 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 SLC35F5Q8WV83 523 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 SLC6A7Q99884 636 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 ABCB8Q9NUT2 735 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 TMEM45AQ9NWC5 275 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 KCNJ5P48544 419 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 VSX2P58304 361 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-203ENST00000427191 BDH1Q02338 343 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 KCNJ11Q14654 390 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 COQ5Q5HYK3 327 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 EOGTQ5NDL2 527 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 HDHD5Q9BXW7 423 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 CD244Q9BZW8 370 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 GPN2Q9H9Y4 310 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-203ENST00000427191 ACOT13Q9NPJ3 140 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 RLIMQ9NVW2 624 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 BCL9O00512 1426 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 MEGF11A6BM72 1044 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 EFCAB7A8K855 629 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 UPK3BL1B0FP48 263 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 UPK3BL2E5RIL1 263 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 MAGEA3P43357 314 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 ASPAP45381 313 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 KCNC1P48547 511 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 DGKZQ13574 1117 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 UGCGQ16739 394 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 EEF1DP3Q658K8 133 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 NOXRED1Q6NXP6 359 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 PAQR3Q6TCH7 311 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 OR8S1Q8NH09 359 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 H3BSA7 217 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 XRCC1P18887 633 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-203ENST00000427191 CDKN1CP49918 316 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-203ENST00000427191 TBC1D15Q8TC07 691 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 FNDC8Q8TC99 324 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 KCNH6Q9H252 994 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 CARS2Q9HA77 564 aaKnown RBP13.91□□□□□ -0.18
PTPN13-203ENST00000427191 C3P01024 1663 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 AARDQ4LEZ3 155 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 FLYWCH1Q4VC44 716 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 TSTD1Q8NFU3 115 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 HBEGFQ99075 208 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF334Q9HCZ1 680 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-203ENST00000427191 KIF25Q9UIL4 384 aa13.91□□□□□ -0.18
PTPN13-203ENST00000427191 UQCRC1P31930 480 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 GBX1Q14549 363 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms