RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SHCBP1LQ9BZQ2 653 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 NDEL1Q9GZM8 345 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ZMYND12Q9H0C1 365 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 POLR3FQ9H1D9 316 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 MTIF3Q9H2K0 278 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 FBXO44Q9H4M3 255 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 RANBP3Q9H6Z4 567 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 DCLRE1BQ9H816 532 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CALHM2Q9HA72 323 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 MRPS30Q9NP92 439 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 MRPL17Q9NRX2 175 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ZDHHC18Q9NUE0 388 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 MIS18AQ9NYP9 233 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 STOX2Q9P2F5 926 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 TXNDC16Q9P2K2 825 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 NOCTQ9UK39 431 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF490Q9ULM2 529 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 B9D1Q9UPM9 204 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 SATB2Q9UPW6 733 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 A3GALT2U3KPV4 340 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 A0A096LPK6 155 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 A0A0U1RQF3 1178 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 GSTTP1A0A1W2PQM5 241 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TCRBV7S3A2A0A539 114 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 FEZF1A0PJY2 475 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SMCO3A2RU48 225 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 METTL21EPA6NDL7 271 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM210A6NLX4 147 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SNTNA6NMZ2 147 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 VWC2LB2RUY7 222 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM150CB9EJG8 249 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MS4A18H0YCH9 400 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 AP4M1O00189 453 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CLDN5O00501 218 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 KLF11O14901 512 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SLC16A5O15375 505 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 STX7O15400 261 aaKnown RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TLX3O43711 291 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 DUX1O43812 170 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SCO2O43819 266 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 HCN1O60741 890 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PRAMEF2O60811 474 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PDE5AO76074 875 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 AHSA1O95433 338 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 ANP32DO95626 131 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 BAG3O95817 575 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TSPAN12O95859 305 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MBPP02686 304 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 FTH1P02794 183 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 ELFN1P0C7U0 828 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CCL2P13500 99 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SRD5A1P18405 259 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CYP3A5P20815 502 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF10P21506 573 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TUBG1P23258 451 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PSMA2P25787 234 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MSNP26038 577 aaKnown RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 NAA10P41227 235 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MAGEA11P43364 429 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 OR3A1P47881 315 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 POU3F4P49335 361 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CCT3P49368 545 aaKnown RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 IST1P53990 364 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TPTEP56180 551 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SKP1P63208 163 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TNNC1P63316 161 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PHEXP78562 749 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PLOD1Q02809 727 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MBTD1Q05BQ5 628 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 LRRC63Q05C16 580 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 IL10RBQ08334 325 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 DSC1Q08554 894 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PPIDQ08752 370 aaKnown RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CALCOCO2Q13137 446 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 FADDQ13158 208 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 KEAP1Q14145 624 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 DMC1Q14565 340 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MESDQ14696 234 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PTGISQ16647 500 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 ITPRIPL2Q3MIP1 535 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 HSDL1Q3SXM5 330 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MOGAT2Q3SYC2 334 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 AGKQ53H12 422 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 LACTB2Q53H82 288 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CMPK2Q5EBM0 449 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 ARL13AQ5H913 290 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 BEX5Q5H9J7 111 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CEP78Q5JTW2 689 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 EFHC1Q5JVL4 640 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SAPCD1Q5SSQ6 148 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 GRTP1Q5TC63 336 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SIGIRRQ6IA17 410 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SIGLEC15Q6ZMC9 328 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 IL17RELQ6ZVW7 336 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MEPCEQ7L2J0 689 aaKnown RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 NOXA1Q86UR1 476 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 STX12Q86Y82 276 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PLCZ1Q86YW0 608 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CBWD2Q8IUF1 395 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 VSTM4Q8IW00 320 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms