RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ITGA10O75578 1167 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 SCELO95171 688 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 HIST1H1TP22492 207 aaPredicted RBP17.19■□□□□ 0.34
NUP50-207ENST00000424634 TYK2P29597 1187 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 ELAVL1Q15717 326 aaKnown RBP17.19■□□□□ 0.34
NUP50-207ENST00000424634 TMEM35AQ53FP2 167 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 KRTCAP3Q53RY4 240 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 DEPDC1Q5TB30 811 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 KHDRBS2Q5VWX1 349 aaKnown RBP17.19■□□□□ 0.34
NUP50-207ENST00000424634 CHSY3Q70JA7 882 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 ZNF321PQ8N8H1 164 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 SRFBP1Q8NEF9 429 aaKnown RBP17.19■□□□□ 0.34
NUP50-207ENST00000424634 HUS1BQ8NHY5 278 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 ITLN2Q8WWU7 325 aaPredicted RBP17.19■□□□□ 0.34
NUP50-207ENST00000424634 ANKRD9Q96BM1 317 aaPredicted RBP17.19■□□□□ 0.34
NUP50-207ENST00000424634 CMTM7Q96FZ5 175 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 CCDC120Q96HB5 630 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 ROGDIQ9GZN7 287 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 CDC42EP4Q9H3Q1 356 aaKnown RBP17.19■□□□□ 0.34
NUP50-207ENST00000424634 ZNF358Q9NW07 568 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 SH3BGRL2Q9UJC5 107 aa17.19■□□□□ 0.34
NUP50-207ENST00000424634 CCDC189A1A4V9 331 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 ASNA1O43681 348 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 ZFAND5O76080 213 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 SIX3O95343 332 aaPredicted RBP17.18■□□□□ 0.34
NUP50-207ENST00000424634 IFNA16P05015 189 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 GFAPP14136 432 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 ECHS1P30084 290 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 PHBP35232 272 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 ALDH18A1P54886 795 aaKnown RBP17.18■□□□□ 0.34
NUP50-207ENST00000424634 ID2Q02363 134 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 RBPJQ06330 500 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 RCN2Q14257 317 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 C3AR1Q16581 482 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.18■□□□□ 0.34
NUP50-207ENST00000424634 AP5B1Q2VPB7 878 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 OR4C11Q6IEV9 310 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 MDGA2Q7Z553 956 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 SULF2Q8IWU5 870 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 CHERPQ8IWX8 916 aaKnown RBP17.18■□□□□ 0.34
NUP50-207ENST00000424634 TMEM132CQ8N3T6 1108 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 SLC44A1Q8WWI5 657 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 SREK1Q8WXA9 508 aaKnown RBP17.18■□□□□ 0.34
NUP50-207ENST00000424634 IFT81Q8WYA0 676 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 ZNF592Q92610 1267 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 CLCA3PQ9Y6N3 262 aa17.18■□□□□ 0.34
NUP50-207ENST00000424634 ACSL3O95573 720 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 SERPINB1P30740 379 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 MAGEA12P43365 314 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 SERPINB8P50452 374 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 HSF1Q00613 529 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 STX4Q12846 297 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 SLAMF1Q13291 335 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 DDX39BQ13838 428 aaKnown RBP17.17■□□□□ 0.34
NUP50-207ENST00000424634 PCBP2Q15366 365 aaKnown RBP eCLIP17.17■□□□□ 0.34
NUP50-207ENST00000424634 TECRLQ5HYJ1 363 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 LIPJQ5W064 366 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 Q6ZPB1 254 aaPredicted RBP17.17■□□□□ 0.34
NUP50-207ENST00000424634 SPPL2CQ8IUH8 684 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 TMEM156Q8N614 296 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 FAM98AQ8NCA5 519 aaKnown RBP17.17■□□□□ 0.34
NUP50-207ENST00000424634 MTERF1Q99551 399 aaKnown RBP17.17■□□□□ 0.34
NUP50-207ENST00000424634 VPS11Q9H270 941 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 DMRT3Q9NQL9 472 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 CPSF2Q9P2I0 782 aaKnown RBP17.17■□□□□ 0.34
NUP50-207ENST00000424634 MTRF1LQ9UGC7 380 aaKnown RBP17.17■□□□□ 0.34
NUP50-207ENST00000424634 TINAGQ9UJW2 476 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 TSC22D4Q9Y3Q8 395 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 ANGPTL3Q9Y5C1 460 aa17.17■□□□□ 0.34
NUP50-207ENST00000424634 NCOA6Q14686 2063 aaPredicted RBP17.17■□□□□ 0.34
NUP50-207ENST00000424634 PLPP1O14494 284 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 OR2J2O76002 312 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 PIK3CBP42338 1070 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 SSR2P43308 183 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 MEOX1P50221 254 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 RPS13P62277 151 aaKnown RBP17.16■□□□□ 0.34
NUP50-207ENST00000424634 GTF2H2Q13888 395 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 SP5Q6BEB4 398 aaPredicted RBP17.16■□□□□ 0.34
NUP50-207ENST00000424634 GTF2H2CQ6P1K8 395 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 GOLGA7Q7Z5G4 137 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 FGD2Q7Z6J4 655 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 MYLK4Q86YV6 388 aaPredicted RBP17.16■□□□□ 0.34
NUP50-207ENST00000424634 OR4N5Q8IXE1 308 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 CYP4Z2PQ8N1L4 340 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 MORN4Q8NDC4 146 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 DAZLQ92904 295 aaKnown RBP17.16■□□□□ 0.34
NUP50-207ENST00000424634 ISL2Q96A47 359 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 TMEM125Q96AQ2 219 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 RGMAQ96B86 450 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 CCDC77Q9BR77 488 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 ZNF717Q9BY31 904 aaPredicted RBP17.16■□□□□ 0.34
NUP50-207ENST00000424634 IPPKQ9H8X2 491 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 ACTR8Q9H981 624 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 PRM3Q9NNZ6 103 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 MYOTQ9UBF9 498 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 ADGRE2Q9UHX3 823 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 YARS2Q9Y2Z4 477 aaKnown RBP17.16■□□□□ 0.34
NUP50-207ENST00000424634 RNF11Q9Y3C5 154 aa17.16■□□□□ 0.34
NUP50-207ENST00000424634 WASHC1A8K0Z3 465 aa17.15■□□□□ 0.34
NUP50-207ENST00000424634 C17orf105B2RV13 164 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms