RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 METTL4Q8N3J2 472 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 CDYL2Q8N8U2 506 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 FAM47BQ8NA70 645 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 METTL6Q8TCB7 284 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 SREK1Q8WXA9 508 aaKnown RBP13□□□□□ -0.33
SEC23B-205ENST00000422877 TM9SF4Q92544 642 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 THOC3Q96J01 351 aaKnown RBP13□□□□□ -0.33
SEC23B-205ENST00000422877 PKNOX2Q96KN3 472 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 CSF3RQ99062 836 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 MAPKAP1Q9BPZ7 522 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 MID1IP1Q9NPA3 183 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 CLDN16Q9Y5I7 305 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 ZNF462Q96JM2 2506 aa13□□□□□ -0.33
SEC23B-205ENST00000422877 SHANK1Q9Y566 2161 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 OR2W5A6NFC9 320 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 A6NL46 340 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 FAM227AF5H4B4 570 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 MANBAO00462 879 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 UBFD1O14562 309 aaKnown RBP12.99□□□□□ -0.33
SEC23B-205ENST00000422877 TM9SF1O15321 606 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 NPHS1O60500 1241 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 DPM1O60762 260 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 CTNSO60931 367 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 ULK1O75385 1050 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 SEC24DO94855 1032 aaPredicted RBP12.99□□□□□ -0.33
SEC23B-205ENST00000422877 PDGFAP04085 211 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 PRB1P04280 392 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 MAOAP21397 527 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 CPN2P22792 545 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 PPP2R1BP30154 601 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 BUD31P41223 144 aaPredicted RBP12.99□□□□□ -0.33
SEC23B-205ENST00000422877 ETV4P43268 484 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 HNRNPFP52597 415 aaKnown RBP12.99□□□□□ -0.33
SEC23B-205ENST00000422877 TNFRSF17Q02223 184 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 SLC13A2Q13183 592 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 SERTAD2Q14140 314 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 CRB2Q5IJ48 1285 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 AGAP7PQ5VUJ5 663 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 CYP20A1Q6UW02 462 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 GPR180Q86V85 440 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 EXOC3L1Q86VI1 746 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 PARP9Q8IXQ6 854 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 M1APQ8TC57 530 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 MTFMTQ96DP5 389 aaKnown RBP12.99□□□□□ -0.33
SEC23B-205ENST00000422877 CNDP1Q96KN2 507 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 AGAP4Q96P64 663 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 MMP25Q9NPA2 562 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 NECTIN3Q9NQS3 549 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 ZNF71Q9NQZ8 489 aaPredicted RBP12.99□□□□□ -0.33
SEC23B-205ENST00000422877 FARSBQ9NSD9 589 aaKnown RBP12.99□□□□□ -0.33
SEC23B-205ENST00000422877 SLC17A7Q9P2U7 560 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 VPS29Q9UBQ0 182 aa12.99□□□□□ -0.33
SEC23B-205ENST00000422877 EXPH5Q8NEV8 1989 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 SAGE2PA6NJ88 616 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 K7EM74 188 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 MASP2O00187 686 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 UROSP10746 265 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 CREB1P16220 341 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 NR1D1P20393 614 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 ALDH3A1P30838 453 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 TLX1P31314 330 aaPredicted RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 HNRNPH2P55795 449 aaKnown RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 ACTN3Q08043 901 aaPredicted RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 TBL3Q12788 808 aaKnown RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 BTBD16Q32M84 506 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 H3F3CQ6NXT2 135 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 ISLR2Q6UXK2 745 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 RNF165Q6ZSG1 346 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 TMEM52Q8NDY8 209 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 PSMF1Q92530 271 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 GATA5Q9BWX5 397 aaPredicted RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 SORBS1Q9BX66 1292 aaKnown RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 EPS8L2Q9H6S3 715 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 WDR41Q9HAD4 459 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 ADAP2Q9NPF8 381 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 RRAGDQ9NQL2 400 aaPredicted RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 FBXW2Q9UKT8 454 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 PPIEQ9UNP9 301 aaKnown RBP12.98□□□□□ -0.33
SEC23B-205ENST00000422877 SLC12A4Q9UP95 1085 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 ASB4Q9Y574 426 aa12.98□□□□□ -0.33
SEC23B-205ENST00000422877 IGHV3-20A0A0C4DH32 117 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 GOLGA6L10A6NI86 522 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 CDK2AP1O14519 115 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 PROM1O43490 865 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 TMPRSS11DO60235 418 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 GUCY1B2O75343 617 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 EEDO75530 441 aaKnown RBP12.97□□□□□ -0.33
SEC23B-205ENST00000422877 ZWINTO95229 277 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 BPGMP07738 259 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 FAM58BPP0C7Q3 252 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 TPP2P29144 1249 aaPredicted RBP12.97□□□□□ -0.33
SEC23B-205ENST00000422877 SOX11P35716 441 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 SLC26A5P58743 744 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 IGLV3-21P80748 117 aaPredicted RBP12.97□□□□□ -0.33
SEC23B-205ENST00000422877 MFAP5Q13361 173 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 RAPSNQ13702 412 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 CASP8Q14790 479 aa12.97□□□□□ -0.33
SEC23B-205ENST00000422877 ELAVL1Q15717 326 aaKnown RBP12.97□□□□□ -0.33
SEC23B-205ENST00000422877 SPIN4Q56A73 249 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms