RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 ACTL6AO96019 429 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 GOT2P00505 430 aaKnown RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 DANCRP0C864 163 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 IGHV4-31P0DP07 118 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 POU2F1P14859 743 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 SLC25A16P16260 332 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 PPP3CBP16298 524 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 GRK3P35626 688 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 COILP38432 576 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 GZMKP49863 264 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 HSD17B7P56937 341 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 RNF4P78317 190 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 OLR1P78380 273 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 POU6F1Q14863 301 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 NRF1Q16656 503 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 PIGGQ5H8A4 983 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 THEMIS2Q5TEJ8 643 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 PTRHD1Q6GMV3 140 aaKnown RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 FAM166AQ6J272 317 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 MFSD7Q6UXD7 560 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 DNAJC14Q6Y2X3 702 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 ZNF550Q7Z398 422 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 STRA8Q7Z7C7 330 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 SLC15A4Q8N697 577 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 GPATCH11Q8N954 259 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 MFSD9Q8NBP5 474 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 PPFIBP2Q8ND30 876 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 OR4L1Q8NH43 312 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 GABPB2Q8TAK5 448 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 AKAP1Q92667 903 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 DAZLQ92904 295 aaKnown RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 ABTB1Q969K4 478 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 REPS1Q96D71 796 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 SPACA9Q96E40 222 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 HS6ST2Q96MM7 605 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 DOHHQ9BU89 302 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 GRIP2Q9C0E4 1043 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 PCBD2Q9H0N5 130 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 P2RY12Q9H244 342 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 C12orf65Q9H3J6 166 aaKnown RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 CLCF1Q9UBD9 225 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 FETUBQ9UGM5 382 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 LIPT1Q9Y234 373 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 R3HDM2Q9Y2K5 976 aaKnown RBP8.2□□□□□ -1.1
TRIM39-206ENST00000420746 CLDN16Q9Y5I7 305 aa8.2□□□□□ -1.1
TRIM39-206ENST00000420746 NDUFS4O43181 175 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 LCMT2O60294 686 aaKnown RBP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 CEP104O60308 925 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 SOD3P08294 240 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 SKILP12757 684 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 PAMP19021 973 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 RPS3P23396 243 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 RBL1P28749 1068 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 RPL21P46778 160 aaKnown RBP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 TTPAP49638 278 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 ACVR1Q04771 509 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 BMPR2Q13873 1038 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 FASTKD1Q53R41 847 aaKnown RBP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 DCST1Q5T197 706 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 PRAMEF20Q5VT98 475 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 ZNF474Q6S9Z5 364 aaPredicted RBP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 ZNF534Q76KX8 674 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 APTXQ7Z2E3 356 aaKnown RBP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 GCNT2Q8N0V5 402 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 OR14A16Q8NHC5 309 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 NUBPLQ8TB37 319 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 FBXW5Q969U6 566 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 STARD4Q96DR4 205 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 ZC3HAV1LQ96H79 300 aaKnown RBP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 C1orf159Q96HA4 380 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 JSRP1Q96MG2 331 aaPredicted RBP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 TUBA1CQ9BQE3 449 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 CHMP5Q9NZZ3 219 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 SLC6A5Q9Y345 797 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 CHCHD2Q9Y6H1 151 aaPredicted RBP8.19□□□□□ -1.1
TRIM39-206ENST00000420746 CLCA3PQ9Y6N3 262 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 EML6Q6ZMW3 1958 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 HEATR5AQ86XA9 2040 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 SCN3AQ9NY46 2000 aa8.19□□□□□ -1.1
TRIM39-206ENST00000420746 TMEM89A2RUT3 159 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 GRID2IPA4D2P6 1211 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 URADA6NGE7 173 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 TRAPPC6AO75865 159 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 SMNDC1O75940 238 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRIM39-206ENST00000420746 STK10O94804 968 aaKnown RBP8.18□□□□□ -1.1
TRIM39-206ENST00000420746 PLAUP00749 431 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 THBDP07204 575 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 CREB1P16220 341 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 CTNNA2P26232 953 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 PPP2R1BP30154 601 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 GMPRP36959 345 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 CDKN1AP38936 164 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 SKIV2L2P42285 1042 aaKnown RBP8.18□□□□□ -1.1
TRIM39-206ENST00000420746 RGS1Q08116 209 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 SPARCL1Q14515 664 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 SEMA3AQ14563 771 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 MIDNQ504T8 468 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 ALKBH5Q6P6C2 394 aaKnown RBP8.18□□□□□ -1.1
TRIM39-206ENST00000420746 ABHD17CQ6PCB6 329 aa8.18□□□□□ -1.1
TRIM39-206ENST00000420746 CLEC2AQ6UVW9 174 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms