RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 TMEM52Q8NDY8 209 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 OR5T3Q8NGG3 340 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 TSPEARQ8WU66 669 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 GTF2H4Q92759 462 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 GFM2Q969S9 779 aaKnown RBP6.47□□□□□ -1.37
CPS1-202ENST00000417946 PMEPA1Q969W9 287 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 COQ8BQ96D53 544 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 SPDL1Q96EA4 605 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 KCNC2Q96PR1 638 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 CSF3RQ99062 836 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 MAPKAP1Q9BPZ7 522 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 RTKNQ9BST9 563 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 TBCDQ9BTW9 1192 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 SLC25A23Q9BV35 468 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 CADM1Q9BY67 442 aaKnown RBP6.47□□□□□ -1.37
CPS1-202ENST00000417946 DPY30Q9C005 99 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 TXLNGQ9NUQ3 528 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 SLC25A37Q9NYZ2 338 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 SLAMF8Q9P0V8 285 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 FTSJ1Q9UET6 329 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 CES1P1Q9UKY3 287 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 PLCL2Q9UPR0 1127 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 MAN2B2Q9Y2E5 1009 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 ATG4BQ9Y4P1 393 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 TMEM184BQ9Y519 407 aaPredicted RBP6.47□□□□□ -1.37
CPS1-202ENST00000417946 PCDHGA7Q9Y5G6 932 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 CLDN16Q9Y5I7 305 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 SLC22A7Q9Y694 548 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 CCDC88CQ9P219 2028 aa6.47□□□□□ -1.37
CPS1-202ENST00000417946 PTPRBP23467 1997 aa6.46□□□□□ -1.37
CPS1-202ENST00000417946 ARHGAP10A1A4S6 786 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 PMS2P1A4D2B8 440 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 BBIP1A8MTZ0 92 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 A8MU76 341 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 TMEM150CB9EJG8 249 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 TGFBR3LH3BV60 316 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 MRASO14807 208 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 SRPX2O60687 465 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 RDH16O75452 317 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 RASSF9O75901 435 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 DNAJC8O75937 253 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 TIAF1O95411 115 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 EIF2S1P05198 315 aaKnown RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 PGRP06401 933 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 FAM58BPP0C7Q3 252 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 SLC35G6P0C7Q6 338 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 ESRRAP11474 423 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 DDCP20711 480 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 EFNA1P20827 205 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 PRPS1L1P21108 318 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 VAMP1P23763 118 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 MSX1P28360 303 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 FRKP42685 505 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 TSFMP43897 325 aaKnown RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 ASMTP46597 345 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 DUSP3P51452 185 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 RAP1GDS1P52306 607 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 EFNA3P52797 238 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 MAPK12P53778 367 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 CLNS1AP54105 237 aaKnown RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 LIM2P55344 173 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 STXBP1P61764 594 aaKnown RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 TRA2BP62995 288 aaKnown RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 OLR1P78380 273 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 BTN3A2P78410 334 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 ACTN3Q08043 901 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 RGS1Q08116 209 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 DMTNQ08495 405 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 GAB1Q13480 694 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 SELPLGQ14242 412 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 DEFB134Q4QY38 66 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 ZC3H12BQ5HYM0 836 aaKnown RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 SNAP47Q5SQN1 464 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 MANEAQ5SRI9 462 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 CCNYL2Q5T2Q4 361 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 LRIF1Q5T3J3 769 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 C18orf63Q68DL7 685 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 OR4F3Q6IEY1 312 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 TRIM40Q6P9F5 258 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 ZNF551Q7Z340 670 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 TMEM151BQ8IW70 566 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 CLECL1Q8IZS7 167 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 C10orf111Q8N326 155 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 FAM47BQ8NA70 645 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 GLB1L3Q8NCI6 653 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 RCBTB1Q8NDN9 531 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 OR8J2Q8NGG1 315 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 OR9A4Q8NGU2 314 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 RERGQ96A58 199 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 CIDECQ96AQ7 238 aaPredicted RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 MIEF2Q96C03 454 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 CMTM5Q96DZ9 223 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 AHCYL2Q96HN2 611 aaKnown RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 SLC39A3Q9BRY0 314 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 INPP5KQ9BT40 448 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 TRIM8Q9BZR9 551 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 PAIP1Q9H074 479 aaKnown RBP6.46□□□□□ -1.38
CPS1-202ENST00000417946 IKZF5Q9H5V7 419 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 REEP4Q9H6H4 257 aa6.46□□□□□ -1.38
CPS1-202ENST00000417946 PDE7BQ9NP56 450 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms