RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 TMEM200CA6NKL6 621 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 H0YIV9 168 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 SMIM24O75264 130 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 H2AFYO75367 372 aaKnown RBP9.54□□□□□ -0.88
HDLBP-206ENST00000417540 CYC1P08574 325 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 MST1P26927 711 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 GSTM2P28161 218 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 BSGP35613 385 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 RFC3P40938 356 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 RAP1GDS1P52306 607 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 FOXA1P55317 472 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 KCNK10P57789 538 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 SLC13A2Q13183 592 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 LAPTM5Q13571 262 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 EIF2S3LQ2VIR3 472 aaKnown RBP9.54□□□□□ -0.88
HDLBP-206ENST00000417540 ZNF750Q32MQ0 723 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 SGO1Q5FBB7 561 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 ACER2Q5QJU3 275 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 ZNF678Q5SXM1 525 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 FAM180BQ6P0A1 224 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 TIFABQ6ZNK6 161 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 L3MBTL4Q8NA19 623 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 OR1N1Q8NGS0 311 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 TRPC4APQ8TEL6 797 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 TM9SF4Q92544 642 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 ANKRD9Q96BM1 317 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-206ENST00000417540 MRPL57Q9BQC6 102 aaKnown RBP9.54□□□□□ -0.88
HDLBP-206ENST00000417540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.54□□□□□ -0.885e-9■■■■□ 22.5
HDLBP-206ENST00000417540 GSTO2Q9H4Y5 243 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 MMACHCQ9Y4U1 282 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 PTGDR2Q9Y5Y4 395 aa9.54□□□□□ -0.88
HDLBP-206ENST00000417540 FBN2P35556 2912 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 A1L4Q6 167 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 BLACEA4D250 179 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 G3V2L1 256 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 VPS4BO75351 444 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 DDAH2O95865 285 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 PDYNP01213 254 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 PROCP04070 461 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 CLPSP04118 112 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 NR2F6P10588 404 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 CPN2P22792 545 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 CNTFP26441 200 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 SKP1P63208 163 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 HSF1Q00613 529 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 FOLH1Q04609 750 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 ACTN3Q08043 901 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 PCDH1Q08174 1060 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 GALNT1Q10472 559 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 OR1C1Q15619 314 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 EXT1Q16394 746 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 GGTA1PQ4G0N0 100 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 ABHD17BQ5VST6 288 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 SPINK14Q6IE38 97 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 MRM1Q6IN84 353 aaKnown RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 H3F3CQ6NXT2 135 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 SH2D5Q6ZV89 423 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 NCCRP1Q6ZVX7 275 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 CCDC91Q7Z6B0 441 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 ATCAYQ86WG3 371 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 C9orf40Q8IXQ3 194 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 CDYL2Q8N8U2 506 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 GALNT11Q8NCW6 608 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 M1APQ8TC57 530 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 AENQ8WTP8 325 aaKnown RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 PPWD1Q96BP3 646 aaKnown RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 CMTM7Q96FZ5 175 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 SLX1AQ9BQ83 275 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 CAPS2Q9BXY5 557 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 SHCBP1LQ9BZQ2 653 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 PITHD1Q9GZP4 211 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 CDCP1Q9H5V8 836 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 ADAP2Q9NPF8 381 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 ERRFI1Q9UJM3 462 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 VPS4AQ9UN37 437 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 DOPEY1Q5JWR5 2465 aa9.53□□□□□ -0.88
HDLBP-206ENST00000417540 RP1L1Q8IWN7 2480 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-206ENST00000417540 IQANK1A0A1B0GTG1 560 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 A0A1W2PR48 441 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 CCDC189A1A4V9 331 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 DYTNA2CJ06 578 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 PINLYPA6NC86 204 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 G3V3Y1 287 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 UBFD1O14562 309 aaKnown RBP9.52□□□□□ -0.89
HDLBP-206ENST00000417540 PRAMEF2O60811 474 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 NEURL1O76050 574 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 LRATO95237 230 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 CLDN9O95484 217 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 RBP1P09455 135 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 CT62P0C5K7 136 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 CREB1P16220 341 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 GPR143P51810 404 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 GPR85P60893 370 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 SLAMF1Q13291 335 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 PCLAFQ15004 111 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 TLR1Q15399 786 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF766Q5HY98 468 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 DEPDC1Q5TB30 811 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 LIPJQ5W064 366 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 FRG2Q64ET8 278 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms