RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAM182AQ5T1J6 154 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 AGAP6Q5VW22 663 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF343Q6P1L6 599 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 Q6ZVQ6 151 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 TUSC5Q8IXB3 177 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 KLHDC8AQ8IYD2 350 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 OR9Q2Q8NGE9 314 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 FIBINQ8TAL6 211 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 MIPOL1Q8TD10 442 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 UBLCP1Q8WVY7 318 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 TEKT1Q969V4 418 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 JAKMIP1Q96N16 626 aaKnown RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 GAL3ST4Q96RP7 486 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 GPATCH1Q9BRR8 931 aaKnown RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 CCM2Q9BSQ5 444 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 UTP14AQ9BVJ6 771 aaKnown RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF350Q9GZX5 532 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 PANK3Q9H999 370 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 MRGBPQ9NV56 204 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 TMEM161AQ9NX61 479 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 THAP10Q9P2Z0 257 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 DBF4Q9UBU7 674 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 KLK11Q9UBX7 282 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 MUTYHQ9UIF7 546 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 FBXL5Q9UKA1 691 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 GMEB2Q9UKD1 530 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 NCKAP1Q9Y2A7 1128 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZFP37Q9Y6Q3 630 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZHX2Q9Y6X8 837 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 DLC1Q96QB1 1528 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 RGPD8O14715 1765 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 SMCHD1A6NHR9 2005 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZFYVE9O95405 1425 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 GTPBP10A4D1E9 387 aaKnown RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 TCP10L2B9ZVM9 353 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC33A1O00400 549 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 SIGLEC5O15389 551 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 PI15O43692 258 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 CRLF1O75462 422 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 CLN5O75503 358 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 GRAP2O75791 330 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 RPLP0P05388 317 aaKnown RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 TSPY4P0CV99 314 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 TSPY10P0CW01 314 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 AOC1P19801 751 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC1A3P43003 542 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 ASIC1P78348 528 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 YWHAHQ04917 246 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 PAX8Q06710 450 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 CNTN1Q12860 1018 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 GPR50Q13585 617 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 RAPSNQ13702 412 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 KIAA0141Q14154 515 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 MAPK11Q15759 364 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 UPP1Q16831 310 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 MS4A18Q3C1V0 323 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 KBTBD12Q3ZCT8 623 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 CCDC184Q52MB2 194 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF776Q68DI1 518 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 PAQR6Q6TCH4 344 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 TICAM2Q86XR7 235 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 Q8N377 158 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 RNF149Q8NC42 400 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 WBP1Q96G27 269 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 TESK2Q96S53 571 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 HNRNPABQ99729 332 aaKnown RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 VIPAS39Q9H9C1 493 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 GPN1Q9HCN4 374 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 CTSZQ9UBR2 303 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 UBQLN2Q9UHD9 624 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 BAIAP2L1Q9UHR4 511 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 PILRAQ9UKJ1 303 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 MOB4Q9Y3A3 225 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 VIRMAQ69YN4 1812 aaKnown RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 ROCK2O75116 1388 aaKnown RBP3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 PARD3Q8TEW0 1356 aa3.12□□□□□ -1.91
HMGB1P11-201ENST00000413899 BLMP54132 1417 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 A2ML1A8K2U0 1454 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 COL5A2P05997 1499 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 IQSEC2Q5JU85 1478 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 NLRP1Q9C000 1473 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 A0A087X0K7 114 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 A0A0U1RQK1 487 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF320A2RRD8 509 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 P2RX6O15547 441 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 ATP9AO75110 1047 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 NME6O75414 186 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 LETM1O95202 739 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 FGF19O95750 216 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 ANGPTL1O95841 491 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 MUTP22033 750 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 ATP5DP30049 168 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 CRYBA2P53672 197 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 SNU13P55769 128 aaKnown RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 ABCE1P61221 599 aaKnown RBP3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 ST8SIA6P61647 398 aa3.11□□□□□ -1.91
HMGB1P11-201ENST00000413899 FKBP1BP68106 108 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms