RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SP140LQ9H930 580 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 IL26Q9NPH9 171 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 GIMAP2Q9UG22 337 aa16.58■□□□□ 0.24
PHRF1-202ENST00000413872 KIR2DS5A0A0G2JLQ3 304 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 A0A0G2JNG1 304 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 SH3PXD2BA1X283 911 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 KIR2DS3K7RE56 304 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 SOCS7O14512 581 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 MAPK3P27361 379 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 KIR2DS5Q14953 304 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 GRHL2Q6ISB3 625 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 ZFYVE21Q9BQ24 234 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 RBCK1Q9BYM8 510 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 A0A1W2PRQ8 180 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 SOX1O00570 391 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 HLA-DPB1P04440 258 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 PGCP20142 388 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 KIAA1614Q5VZ46 1190 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 FIP1L1Q6UN15 594 aaKnown RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 HSDL2Q6YN16 418 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 SATL1Q86VE3 508 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 SHKBP1Q8TBC3 707 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 NAT14Q8WUY8 206 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 HCN2Q9UL51 889 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 PCDHB14Q9Y5E9 798 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 ZCWPW2A0A1B0GU75 182 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 OR3A3P47888 321 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 OR3A2P47893 321 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 BLMHQ13867 455 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 ZNF542PQ5EBM4 170 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 ALG1LQ6GMV1 187 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 OR56A3Q8NH54 315 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 BMFQ96LC9 184 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 PITHD1Q9GZP4 211 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 CST11Q9H112 138 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 PPP4R1LQ9P1A2 415 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 ITGB1BP2Q9UKP3 347 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 NPIPB15A6NHN6 443 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 GRXCR1A8MXD5 290 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 TMX2-CTNND1H3BSU7 103 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 FAAHO00519 579 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 TFECO14948 347 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 AREL1O15033 823 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 TBX10O75333 385 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 EEDO75530 441 aaKnown RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 DBIP07108 87 aaKnown RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 OR12D1P0DN82 309 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 CD36P16671 472 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 SELENOVP59797 346 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 PLP2Q04941 152 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 DSG2Q14126 1118 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 IDNKQ5T6J7 187 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 ALKAL1Q6UXT8 129 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 C1orf216Q8TAB5 229 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 TNFAIP8L1Q8WVP5 186 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 SH3YL1Q96HL8 342 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-202ENST00000413872 LPAR4Q99677 370 aa16.57■□□□□ 0.24
PHRF1-202ENST00000413872 ITIH1P19827 911 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 RORAP35398 523 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 MC1RQ01726 317 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 RAB6CQ53S08 254 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 RNASE12Q5GAN4 147 aaKnown RBP16.56■□□□□ 0.24
PHRF1-202ENST00000413872 HACD2Q6Y1H2 254 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 TAS1R1Q7RTX1 841 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 TMEM17Q86X19 198 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 CARM1Q86X55 608 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 GID4Q8IVV7 300 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 GHDCQ8N2G8 530 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 SDR16C5Q8N3Y7 309 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 EZH1Q92800 747 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-202ENST00000413872 ZNF778Q96MU6 729 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 DOHHQ9BU89 302 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 RAB6CQ9H0N0 254 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 ENTPD6O75354 484 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 GDI2P50395 445 aaKnown RBP16.56■□□□□ 0.24
PHRF1-202ENST00000413872 ABRAXAS2Q15018 415 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 CTC1Q2NKJ3 1217 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 USP53Q70EK8 1073 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 FUBP1Q96AE4 644 aaKnown RBP16.56■□□□□ 0.24
PHRF1-202ENST00000413872 SPO11Q9Y5K1 396 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 NHSL1Q5SYE7 1610 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 A0A0X1KG70 313 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 A6NCN8 305 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 ACSL1P33121 698 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 GJA8P48165 433 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 PMS2P3Q13401 168 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 SERTAD2Q14140 314 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 TTLL10Q6ZVT0 673 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 ZSWIM9Q86XI8 627 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 AMBNQ9NP70 447 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 TMEM45AQ9NWC5 275 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 STOX2Q9P2F5 926 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-202ENST00000413872 GADD45AP24522 165 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 KIR2DS3Q14952 304 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 OR4D1Q15615 310 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 UGT3A2Q3SY77 523 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 SHQ1Q6PI26 577 aaKnown RBP16.56■□□□□ 0.24
PHRF1-202ENST00000413872 TP53INP2Q8IXH6 220 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 KLHDC8AQ8IYD2 350 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 DTD2Q96FN9 168 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms