RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 MBLAC1A4D2B0 266 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 MYMKA6NI61 221 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ANKRD66B4E2M5 251 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 E9PI62 339 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SMAD6O43541 496 aaKnown RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ECE2O60344 883 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SDC3O75056 442 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 TM7SF2O76062 418 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 PAHP00439 452 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 CSF2P04141 144 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SERPINF2P08697 491 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 STAG3L3P0CL85 134 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ODC1P11926 461 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 KRT3P12035 628 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 CBLP22681 906 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 FCARP24071 287 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 AXLP30530 894 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 CD151P48509 253 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 PDX1P52945 283 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SUCLG1P53597 346 aaKnown RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 NAPAP54920 295 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 HAND2P61296 217 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 KLC1Q07866 573 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 NME3Q13232 169 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 DHX34Q14147 1143 aaKnown RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SQLEQ14534 574 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SPHARQ15513 63 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 HLFQ16534 295 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ODF4Q2M2E3 257 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF311Q5JNZ3 666 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ATF7IP2Q5U623 682 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SEL1L3Q68CR1 1132 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 NIPAL3Q6P499 406 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 FAM122CQ6P4D5 195 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF549Q6P9A3 640 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 LINGO4Q6UY18 593 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 RAD9BQ6WBX8 426 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SYT10Q6XYQ8 523 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 CDK20Q8IZL9 346 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF444Q8N0Y2 327 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 CRYBG2Q8N1P7 616 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 UBE2J2Q8N2K1 259 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 SLC43A2Q8N370 569 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 NECAB1Q8N987 351 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 DRAXINQ8NBI3 349 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 OR4L1Q8NH43 312 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 PIGTQ969N2 578 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 TMEM45BQ96B21 275 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 PHF21AQ96BD5 680 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 RBM41Q96IZ5 413 aaKnown RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 OR1F2PQ96R84 312 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 MTG1Q9BT17 334 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 MIS12Q9H081 205 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 MAGT1Q9H0U3 335 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 ARRDC1-AS1Q9H2J1 176 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 PNNQ9H307 717 aaKnown RBP4.12□□□□□ -1.75
BRCA1-204ENST00000412061 EHD1Q9H4M9 534 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 TLE6Q9H808 572 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 APMAPQ9HDC9 416 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 RNF7Q9UBF6 113 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 P2RX2Q9UBL9 471 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 CRLS1Q9UJA2 301 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 GRID1Q9ULK0 1009 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 TRAF3IP3Q9Y228 551 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 OR10H1Q9Y4A9 318 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 PCSK5Q92824 1860 aa4.12□□□□□ -1.75
BRCA1-204ENST00000412061 PLEKHG2Q9H7P9 1386 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 TNIKQ9UKE5 1360 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 TRIP12Q14669 1992 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 ZMYM6O95789 1325 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 IGLV5-52A0A0A0MRZ9 124 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 ARHGEF35A5YM69 484 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 OR52A4PA6NMU1 304 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 MEI4A8MW99 385 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 LRRTM2O43300 516 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 BUD23O43709 281 aaKnown RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 RNASEH1O60930 286 aaKnown RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CLN5O75503 358 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CTAG2O75638 210 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 RFPL2O75678 378 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 SLITRK3O94933 977 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 OAZ2O95190 189 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 AGTP01019 485 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 PRSS2P07478 247 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 GSTA2P09210 222 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 HIST1H2AGP0C0S8 130 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CKMT2P17540 419 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 HOXD10P28358 340 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 SSTR2P30874 369 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CEBPDP49716 269 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 ACADVLP49748 655 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CLCN4P51793 760 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 PRMT2P55345 433 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 RPS8P62241 208 aaKnown RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 SP3Q02447 781 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 WDR43Q15061 677 aaKnown RBP eCLIP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CALCRLQ16602 461 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 TATDN3Q17R31 274 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 HSP90B2PQ58FF3 399 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 NDUFAF5Q5TEU4 345 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms