RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 VAX1Q5SQQ9 334 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 STXBP5Q5T5C0 1151 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 TMEM268Q5VZI3 342 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CDC42EP5Q6NZY7 148 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 FAM122CQ6P4D5 195 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 ISLR2Q6UXK2 745 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CASP12Q6UXS9 341 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF767PQ75MW2 155 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 ASRGL1Q7L266 308 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 PHF5AQ7RTV0 110 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 DHDDSQ86SQ9 333 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 LCA5Q86VQ0 697 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 HOGA1Q86XE5 327 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 LRRC47Q8N1G4 583 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC35F6Q8N357 371 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 C1orf52Q8N6N3 182 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 NOA1Q8NC60 698 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC37A3Q8NCC5 494 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 HJURPQ8NCD3 748 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CHST14Q8NCH0 376 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR4Q3Q8NH05 313 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 BBS10Q8TAM1 723 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 APBB2Q92870 758 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 PBXIP1Q96AQ6 731 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 EAF2Q96CJ1 260 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 MASTLQ96GX5 879 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 COQ2Q96H96 371 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SCLYQ96I15 445 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGF2BP2-AS1Q96M15 143 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 PRRC1Q96M27 445 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 RIPOR3Q96MK2 946 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 NAP1L3Q99457 506 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 DNAJC7Q99615 494 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 RBBP8Q99708 897 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SDF4Q9BRK5 362 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 KATNB1Q9BVA0 655 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 LDHAL6BQ9BYZ2 381 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 QRSL1Q9H0R6 528 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZSCAN16Q9H4T2 348 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 KLHL31Q9H511 634 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 MINDY3Q9H8M7 445 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 Q9H8V8 135 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 MED20Q9H944 212 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 A1CFQ9NQ94 594 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 RNF146Q9NTX7 359 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 BLOC1S4Q9NUP1 217 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SIDT1Q9NXL6 827 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 MTCH1Q9NZJ7 389 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 ANKMY1Q9P2S6 941 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 MAGEC2Q9UBF1 373 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 FETUBQ9UGM5 382 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC7A7Q9UM01 511 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CAPN11Q9UMQ6 739 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CNTN6Q9UQ52 1028 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 RCL1Q9Y2P8 373 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 TMEM184BQ9Y519 407 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 PPIAL4AQ9Y536 164 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SNX9Q9Y5X1 595 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 EID1Q9Y6B2 187 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 RPS6KL1Q9Y6S9 549 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 FMN2Q9NZ56 1722 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 TDRD9Q8NDG6 1382 aaKnown RBP-1.85□□□□□ -2.7
RNU4-88P-201ENST00000411220 MYBBP1AQ9BQG0 1328 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 MYO18AQ92614 2054 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ADAMTSL3P82987 1691 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 COL4A6Q14031 1691 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 BCL9LQ86UU0 1499 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRBV6-7A0A0A0MS04 114 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 A0A1B0GVM2 712 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 LRRD1A4D1F6 860 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PI4KAP2A4QPH2 592 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 IZUMO1RA6ND01 250 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 GPR31O00270 319 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 RFXANKO14593 260 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ENPP3O14638 875 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ABCD4O14678 606 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 MCF2LO15068 1137 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 HOXC11O43248 304 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 GCM2O75603 506 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 DNAJC8O75937 253 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCNDBP1O95273 360 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 NPTXRO95502 500 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC16A8O95907 504 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PGK1P00558 417 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 NGFP01138 241 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PIGRP01833 764 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGLV7-43P04211 117 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PRM2P04554 102 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CSF1RP07333 972 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PLEKP08567 350 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGHV4-38-2P0DP08 117 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ATF3P18847 181 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ATF6P18850 670 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC9A1P19634 815 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CYP2A7P20853 494 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CPT2P23786 658 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CHMP24386 653 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 EEF1DP29692 281 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 HOXA9P31269 272 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMPOP42166 694 aaKnown RBP-1.85□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms