RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 TARDBPQ13148 414 aaKnown RBP eCLIP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 KLF1Q13351 362 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ARHGAP15Q53QZ3 475 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CPTPQ5TA50 214 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 BTBD8Q5XKL5 378 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 DPPA4Q7L190 304 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PIGWQ7Z7B1 504 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 AMIGO2Q86SJ2 522 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ASPGQ86U10 573 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 TRABD2AQ86V40 505 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 UEVLDQ8IX04 471 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ENTHD1Q8IYW4 607 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 KCNG3Q8TAE7 436 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 FIBINQ8TAL6 211 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CHPT1Q8WUD6 406 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CASD1Q96PB1 797 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CPNE1Q99829 537 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 RTN4RQ9BZR6 473 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ZNF556Q9HAH1 456 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ERVK-5Q9HDB9 667 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 MBNL1Q9NR56 388 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CISHQ9NSE2 258 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ACSS1Q9NUB1 689 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 TMEM140Q9NV12 185 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 MAGEL2Q9UJ55 1249 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 NME7Q9Y5B8 376 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 U3KQV3 271 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ADCY10Q96PN6 1610 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ZNF541Q9H0D2 1346 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CROCC2H7BZ55 1655 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CCDC187A0A096LP49 1063 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 KANTRA0A1W2PQU2 76 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 SURF4O15260 269 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 TOX3O15405 576 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 GREM1O60565 184 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 SHOX2O60902 331 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 SCN2BO60939 215 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 LHCGRP22888 699 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 AVPR2P30518 371 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 DCTDP32321 178 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CASP3P42574 277 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CHRNA4P43681 627 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 NDUFA6P56556 154 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 NDUFAF6Q330K2 333 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ZRANB3Q5FWF4 1079 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PRAMEF18Q5VWM3 479 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 LHFPL4Q7Z7J7 247 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 SLC44A3Q8N4M1 653 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 LPGAT1Q92604 370 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ZNF764Q96H86 408 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ARHGAP9Q9BRR9 750 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 LRFN3Q9BTN0 628 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 OR2D2Q9H210 308 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PORCNQ9H237 461 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 TMEM185BQ9H7F4 350 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 NT5DC2Q9H857 520 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 RRAGCQ9HB90 399 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 INIPQ9NRY2 104 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 GPR83Q9NYM4 423 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 DNAJC5BQ9UF47 199 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 GPR55Q9Y2T6 319 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 TRAF6Q9Y4K3 522 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ATP23Q9Y6H3 246 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 WDR17Q8IZU2 1322 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 LOC105369274A0A096LPK9 316 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 LOC102723532A0A0G2JNH3 316 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 EXOC1LA0A1B0GW35 172 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ZNF729A6NN14 1252 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 RAB27BO00194 218 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 SLC31A1O15431 190 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 KCNQ2O43526 872 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PEX10O60683 326 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 RFPL3O75679 317 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 FBXO45P0C2W1 286 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CD82P27701 267 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 MC4RP32245 332 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CRHR1P34998 444 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 HSD17B3P37058 310 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 SLC6A12P48065 614 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 GPR143P51810 404 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 MANFP55145 182 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 CDC20Q12834 499 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 MTM1Q13496 603 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 C1DQ13901 141 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 GANABQ14697 944 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 DPY19L1Q2PZI1 675 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 ZNF470Q6ECI4 717 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PADI6Q6TGC4 694 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 VSTM1Q6UX27 236 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 KIAA1324Q6UXG2 1013 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PROSER1Q86XN7 944 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PDSS2Q86YH6 399 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 OR4N4Q8N0Y3 316 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PCDH20Q8N6Y1 951 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 RHPN1Q8TCX5 695 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 IP6K1Q92551 441 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 TTC9Q92623 222 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 BCL2L2Q92843 193 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 SLCO2A1Q92959 643 aa5.05□□□□□ -1.6
R3HDM1-204ENST00000410054 PABPC5Q96DU9 382 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms