RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CST6Q15828 149 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 CFAP77Q6ZQR2 320 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 CPNE8Q86YQ8 564 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 FAM86B1Q8N7N1 296 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SHKBP1Q8TBC3 707 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF514Q96K75 400 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM175Q9BSA9 504 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SLC39A1Q9NY26 324 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TRBC2A0A5B9 178 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 RAD51DO75771 328 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SLC5A9Q2M3M2 681 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SPIN4Q56A73 249 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF550Q7Z398 422 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 CREB3L4Q8TEY5 395 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TMCO6Q96DC7 493 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ARL5BQ96KC2 179 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 MACROD1Q9BQ69 325 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 B3GNT2Q9NY97 397 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ARGFXA6NJG6 315 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 APEHP13798 732 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 UFM1P61960 85 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 MSL3Q8N5Y2 521 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 VGLL2Q8N8G2 317 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 CDKN2AIPNLQ96HQ2 116 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 WDR92Q96MX6 357 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 INPP4AQ96PE3 977 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TREX2Q9BQ50 279 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 NSUN3Q9H649 340 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 DHX33Q9H6R0 707 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TRIM36Q9NQ86 728 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SCML2Q9UQR0 700 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 PROM1O43490 865 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ZIC2O95409 532 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 MAS1P04201 325 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 H1F0P07305 194 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 RPL19P84098 196 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 FAM214AQ32MH5 1076 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 MEX3DQ86XN8 651 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 APLFQ8IW19 511 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 LIPHQ8WWY8 451 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 FOLH1BQ9HBA9 442 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SMOXQ9NWM0 555 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 DLGAP4Q9Y2H0 992 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SLIT1O75093 1534 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 BBIP1A8MTZ0 92 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 HMGB3O15347 200 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SIRPAP78324 504 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 GAS6Q14393 721 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 HNF4GQ14541 408 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 C14orf80Q86SX3 495 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM25Q86YD3 366 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SLC15A3Q8IY34 581 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 OR4C15Q8NGM1 316 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SLC44A1Q8WWI5 657 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TSPAN18Q96SJ8 248 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ACTR10Q9NZ32 417 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM184BQ9Y519 407 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 VSTM2BA6NLU5 285 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 K7ERQ8 282 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 CLEC3BP05452 202 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 PNMTP11086 282 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SYT16Q17RD7 645 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 PTCHD3Q3KNS1 767 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 GPR157Q5UAW9 335 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ASPGQ86U10 573 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 APCDD1Q8J025 514 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 AENQ8WTP8 325 aaKnown RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ALG3Q92685 438 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 VSX1Q9NZR4 365 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 B4GALT6Q9UBX8 382 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 OR14J1Q9UGF5 321 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SARDHQ9UL12 918 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF175Q9Y473 711 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 MROH2AA6NES4 1674 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 MYH7BA7E2Y1 1941 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SETBP1Q9Y6X0 1596 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 G3V3Y1 287 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SGK494L7N484 410 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 PDYNP01213 254 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 OXTRP30559 389 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 RORCP51449 518 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SLC18A2Q05940 514 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 RBPJQ06330 500 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 GBX1Q14549 363 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 KLHL22Q53GT1 634 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TNFAIP8L3Q5GJ75 292 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF585AQ6P3V2 769 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 SAMD14Q8IZD0 417 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 LGI4Q8N135 537 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ADAMTS19Q8TE59 1207 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 HSPA12BQ96MM6 686 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 C5AR2Q9P296 337 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 WRAP73Q9P2S5 460 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-203ENST00000409672 ACTL7AQ9Y615 435 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 PLSCR5A0PG75 271 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 ITM2AO43736 263 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 VEGFDO43915 354 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 GCH1P30793 250 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 NFE2L1Q14494 772 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms