RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ARL13AQ5H913 290 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 TCEAL5Q5H9L2 206 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TOR1AIP1Q5JTV8 583 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TMEM236Q5W0B7 351 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SFRP4Q6FHJ7 346 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 SULT1C3Q6IMI6 304 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ARMC6Q6NXE6 501 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PMF1Q6P1K2 205 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CRTC1Q6UUV9 634 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PRSS42Q7Z5A4 293 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 AMIGO1Q86WK6 493 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PARP16Q8N5Y8 322 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SLC22A17Q8WUG5 538 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 FAR1Q8WVX9 515 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CRYGNQ8WXF5 182 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SLC38A4Q969I6 547 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TMEM125Q96AQ2 219 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TESCQ96BS2 214 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 RNF31Q96EP0 1072 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 DYNLL2Q96FJ2 89 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 BOD1Q96IK1 185 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 HSFY1Q96LI6 401 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 NELL2Q99435 816 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CBWD1Q9BRT8 395 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 C6orf62Q9GZU0 229 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 C2orf40Q9H1Z8 148 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CPVLQ9H3G5 476 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ZNF768Q9H5H4 540 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 OBP2BQ9NPH6 170 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 FBXL12Q9NXK8 326 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 LUZP4Q9P127 313 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 INTS6Q9UL03 887 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 TMCC3Q9ULS5 477 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CNTN6Q9UQ52 1028 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MRPS17Q9Y2R5 130 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 PRELID3BQ9Y3B1 194 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MRPL11Q9Y3B7 192 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 STON1Q9Y6Q2 735 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 DMXL2Q8TDJ6 3036 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 A0A096LPK6 155 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 A0A0X1KG70 313 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ATP6AP2A0A1C7CYW4 349 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 TCRBV5S1A1TA0A578 114 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 MEIOCA2RUB1 952 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 I3L521 148 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 BTN3A3O00478 584 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 STX16O14662 325 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 TSPAN4O14817 238 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 NPC1O15118 1278 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 MUSKO15146 869 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 INPP4BO15327 924 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 MSH4O15457 936 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 SEPT4O43236 478 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 RGS10O43665 173 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 PI15O43692 258 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 TRIAP1O43715 76 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 TPST1O60507 370 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 TLR5O60602 858 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 FAM20BO75063 409 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 SEMA3DO95025 777 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 TSPAN12O95859 305 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 NPPAP01160 153 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 IFNA7P01567 189 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 HLA-DRAP01903 254 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 PRB1P04280 392 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 PRKCGP05129 697 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ALPPP05187 535 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 PRKCBP05771 671 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ADRB2P07550 413 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ITGAMP11215 1152 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 EGR1P18146 543 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 RAB3AP20336 220 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 PPIFP30405 207 aaKnown RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 PRKAR1BP31321 381 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 PRKAG1P54619 331 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 DNAJB13P59910 316 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 RAB14P61106 215 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 VBP1P61758 197 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 RPL7AP62424 266 aaKnown RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 SRSF1Q07955 248 aaKnown RBP eCLIP5.23□□□□□ -1.572e-6■□□□□ 10.6
CLK1-202ENST00000409403 RGS1Q08116 209 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 MRPL28Q13084 256 aaKnown RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 CUL2Q13617 745 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 CAMK1Q14012 370 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 CLCA4Q14CN2 919 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 MFSD13AQ14CX5 517 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 RUNDC3AQ59EK9 446 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ARHGAP40Q5TG30 622 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 ZNF691Q5VV52 312 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 FCRLBQ6BAA4 426 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 TYW3Q6IPR3 259 aaKnown RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 CASC4Q6P4E1 433 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 CORO6Q6QEF8 472 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 SCARA5Q6ZMJ2 495 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 EFL1Q7Z2Z2 1120 aaKnown RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 TMCO2Q7Z6W1 182 aaPredicted RBP5.23□□□□□ -1.57
CLK1-202ENST00000409403 SYVN1Q86TM6 617 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 CPXCR1Q8N123 301 aa5.23□□□□□ -1.57
CLK1-202ENST00000409403 EMC1Q8N766 993 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms