RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 LRRC25Q8N386 305 aaPredicted RBP8.5□□□□□ -1.05
NUP43-204ENST00000403890 MPP5Q8N3R9 675 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 ZNF441Q8N8Z8 693 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 MBD3L2Q8NHZ7 208 aaPredicted RBP8.5□□□□□ -1.05
NUP43-204ENST00000403890 TMEM171Q8WVE6 324 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 SREK1Q8WXA9 508 aaKnown RBP8.5□□□□□ -1.05
NUP43-204ENST00000403890 ASB11Q8WXH4 323 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 PEX13Q92968 403 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 FAM136AQ96C01 138 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 WFIKKN1Q96NZ8 548 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 BIRC8Q96P09 236 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 SLC30A3Q99726 388 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 FAM118BQ9BPY3 351 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 CALHM2Q9HA72 323 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 CCDC177Q9NQR7 707 aaPredicted RBP8.5□□□□□ -1.05
NUP43-204ENST00000403890 ZNHIT6Q9NWK9 470 aaKnown RBP8.5□□□□□ -1.05
NUP43-204ENST00000403890 CDC42EP3Q9UKI2 254 aa8.5□□□□□ -1.05
NUP43-204ENST00000403890 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.5□□□□□ -1.05
NUP43-204ENST00000403890 MGAM2Q2M2H8 2515 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 ANK3Q12955 4377 aaKnown RBP8.49□□□□□ -1.05
NUP43-204ENST00000403890 H3BMM5 538 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 KCNAB3O43448 404 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 ZBTB14O43829 449 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 TMCC2O75069 709 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 NIPSNAP2O75323 286 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 SERPIND1P05546 499 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 ZNF888P0CJ79 500 aaPredicted RBP8.49□□□□□ -1.05
NUP43-204ENST00000403890 CRYGSP22914 178 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 IMPA1P29218 277 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 PPP2R1BP30154 601 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 SKIV2L2P42285 1042 aaKnown RBP8.49□□□□□ -1.05
NUP43-204ENST00000403890 TBL3Q12788 808 aaKnown RBP8.49□□□□□ -1.05
NUP43-204ENST00000403890 VEZF1Q14119 521 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 CLEC12BQ2HXU8 276 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 ASTE1Q2TB18 679 aaPredicted RBP8.49□□□□□ -1.05
NUP43-204ENST00000403890 C17orf64Q86WR6 236 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 TMEM132CQ8N3T6 1108 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 FAM71DQ8N9W8 422 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 OR5L2Q8NGL0 311 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 UTP15Q8TED0 518 aaKnown RBP8.49□□□□□ -1.05
NUP43-204ENST00000403890 IGFBPL1Q8WX77 278 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 ZBED6CLQ96FA7 236 aaPredicted RBP8.49□□□□□ -1.05
NUP43-204ENST00000403890 DOCK7Q96N67 2140 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 SFXN3Q9BWM7 321 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 PRDM14Q9GZV8 571 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 LRTM1Q9HBL6 345 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 ADAP2Q9NPF8 381 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 GALPQ9UBC7 116 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 CAMK2AQ9UQM7 478 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 EFR3BQ9Y2G0 817 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 CLCA3PQ9Y6N3 262 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 NINQ8N4C6 2090 aa8.49□□□□□ -1.05
NUP43-204ENST00000403890 FREM3P0C091 2139 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 MEGF8Q7Z7M0 2845 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 LRRC3CA6NJW4 275 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 ERI2A8K979 691 aaKnown RBP8.48□□□□□ -1.05
NUP43-204ENST00000403890 A8MXE2 369 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 GFYI3L273 518 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 PJA2O43164 708 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 OR1F1O43749 312 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 AKR1B10O60218 316 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 ZNF354AO60765 605 aaPredicted RBP8.48□□□□□ -1.05
NUP43-204ENST00000403890 ESR1P03372 595 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 TPM1P09493 284 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 CDH1P12830 882 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 GDF1P27539 372 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 THBS2P35442 1172 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 MARCKSL1P49006 195 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 DIO3P55073 304 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 TBPL1P62380 186 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 RNF4P78317 190 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 RGS1Q08116 209 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 FOXF2Q12947 444 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 SLC13A2Q13183 592 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 RCAN2Q14206 197 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 TCEAL1Q15170 157 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 ELAVL1Q15717 326 aaKnown RBP8.48□□□□□ -1.05
NUP43-204ENST00000403890 ZNF791Q3KP31 576 aaPredicted RBP8.48□□□□□ -1.05
NUP43-204ENST00000403890 BBS9Q3SYG4 887 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 VASNQ6EMK4 673 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 PPP1R21Q6ZMI0 780 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 SDCCAG8Q86SQ7 713 aaPredicted RBP8.48□□□□□ -1.05
NUP43-204ENST00000403890 SCUBE1Q8IWY4 988 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 GOLGA6L1Q8N7Z2 621 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 C9orf106Q8NAJ2 232 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 OR8K3Q8NH51 312 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 ROBO4Q8WZ75 1007 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 DAZLQ92904 295 aaKnown RBP8.48□□□□□ -1.05
NUP43-204ENST00000403890 JSRP1Q96MG2 331 aaPredicted RBP8.48□□□□□ -1.05
NUP43-204ENST00000403890 PIGQQ9BRB3 760 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 MED18Q9BUE0 208 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 BEX2Q9BXY8 128 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 OSBPL8Q9BZF1 889 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 PIGMQ9H3S5 423 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 GOLPH3Q9H4A6 298 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 SH2D2AQ9NP31 389 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 KLHL28Q9NXS3 571 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 SH2B3Q9UQQ2 575 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 ZNF148Q9UQR1 794 aa8.48□□□□□ -1.05
NUP43-204ENST00000403890 TCAF1Q9Y4C2 921 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms