RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PARP16Q8N5Y8 322 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 OR9A1PQ8NGU1 263 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 UCN3Q969E3 161 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 TIFAQ96CG3 184 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 CARD8Q9Y2G2 431 aa12.1□□□□□ -0.47
PPP4R1-202ENST00000400555 ALPK2Q86TB3 2170 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 TLR4O00206 839 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 LRRTM2O43300 516 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 CDK1P06493 297 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 RGS6P49758 472 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ERVFC1P60507 584 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 SP140Q13342 867 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 VEZF1Q14119 521 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ZNF805Q5CZA5 627 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 MFSD4AQ8N468 514 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 GEMIN6Q8WXD5 167 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 TFGQ92734 400 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 TMEM19Q96HH6 336 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 PIP5K1AQ99755 562 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 C17orf62Q9BQA9 187 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ASIC5Q9NY37 505 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 C1orf105O95561 183 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 GSTT2P0CG29 244 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 GSTT2BP0CG30 244 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 CHMP24386 653 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 CTNNB1P35222 781 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 PIK3CBP42338 1070 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 SSR2P43308 183 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 MAP4K2Q12851 820 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 MTAPQ13126 283 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 GGTA1PQ4G0N0 100 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 USP30Q70CQ3 517 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ADIPOR2Q86V24 386 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 TRAM1L1Q8N609 369 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 TP53INP1Q96A56 240 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ARSGQ96EG1 525 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ASPNQ9BXN1 380 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 CXorf36Q9H7Y0 433 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ZCCHC3Q9NUD5 404 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 SPATA6Q9NWH7 488 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ZNF226Q9NYT6 803 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 KLHL3Q9UH77 587 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 PCM1Q15154 2024 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ALOX5P09917 674 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 GSTM5P46439 218 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 CLCNKAP51800 687 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 XKP51811 444 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 CRYBA2P53672 197 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 CAV3P56539 151 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 LSM11P83369 360 aaKnown RBP eCLIP12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 SNAPC1Q16533 368 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ATAD3BQ5T9A4 648 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 ZDHHC20Q5W0Z9 365 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 TMEM53Q6P2H8 277 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 SFTPA1Q8IWL2 248 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 HORMAD2Q8N7B1 307 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 DMRT3Q9NQL9 472 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 GPATCH2Q9NW75 528 aa12.09□□□□□ -0.47
PPP4R1-202ENST00000400555 AGAP5A6NIR3 686 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 ANHXE9PGG2 379 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 PRMT3O60678 531 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 TMCC2O75069 709 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 SLCO2B1O94956 709 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 MAT2AP31153 395 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 PCGF2P35227 344 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 UGT2B15P54855 530 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 TAP2Q03519 686 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 ZNF750Q32MQ0 723 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 TRIM48Q8IWZ4 208 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 OR52N2Q8NGI0 321 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 DACT3Q96B18 629 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 FERD3LQ96RJ6 166 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 MCCC1Q96RQ3 725 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 MMP27Q9H306 513 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 A0A0C4DFX4 3053 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 GCM2O75603 506 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 UPK1BO75841 260 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 EPHX1P07099 455 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 TSPAN19P0C672 248 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 ZNF30P17039 623 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 INPP1P49441 399 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 CRISP1P54107 249 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 RAB8AP61006 207 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 LASP1Q14847 261 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 SYPL1Q16563 259 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 LYSMD2Q8IV50 215 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 SLAIN1Q8ND83 568 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 CHTF18Q8WVB6 975 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 NUS1Q96E22 293 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 QPCTLQ9NXS2 382 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 AHSPQ9NZD4 102 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 GULP1Q9UBP9 304 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 SPIN1Q9Y657 262 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 CACNA1IQ9P0X4 2223 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 SOBPA7XYQ1 873 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 CDRT1O95170 752 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 OXSR1O95747 527 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms