RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TCP11X1B4DZS4 312 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 HDAC3O15379 428 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NKX2-8O15522 239 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RRP8O43159 456 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PROM1O43490 865 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RGS14O43566 566 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PCDH7O60245 1069 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EDF1O60869 148 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 AIFM1O95831 613 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FHP07954 510 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TACR1P25103 407 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FOLR3P41439 243 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 BTG2P78543 158 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TNFRSF17Q02223 184 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 OCA2Q04671 838 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ACSM2AQ08AH3 577 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TUBB8Q3ZCM7 444 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SPDYAQ5MJ70 313 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C6orf136Q5SQH8 315 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 VWA5B1Q5TIE3 1220 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ACSM2BQ68CK6 577 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NOXRED1Q6NXP6 359 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PPP1R32Q7Z5V6 425 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GPR180Q86V85 440 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FAM76AQ8TAV0 307 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PIWIL2Q8TC59 973 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TSLPQ969D9 159 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TM4SF18Q96CE8 201 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CRB3Q9BUF7 120 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MEAF6Q9HAF1 191 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CPNE5Q9HCH3 593 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NECTIN3Q9NQS3 549 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NMRK1Q9NWW6 199 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C1orf109Q9NX04 203 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 AHSPQ9NZD4 102 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C3orf18Q9UK00 162 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MKL2Q9ULH7 1088 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EXO1Q9UQ84 846 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 POLR3HQ9Y535 204 aaPredicted RBP11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 HS3ST3B1Q9Y662 390 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 A0A1W2PS29 197 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ARHGAP10A1A4S6 786 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SOCS6O14544 535 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PGRMC2O15173 223 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 B4GALT2O60909 372 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PEX11AO75192 247 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ALOX15P16050 662 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SDC1P18827 310 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MAOAP21397 527 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 IL10P22301 178 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CPN2P22792 545 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MDH1P40925 334 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MAPK12P53778 367 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GYS2P54840 703 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RPL38P63173 70 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 UGT8Q16880 541 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GALNTL6Q49A17 601 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SLC9B1Q4ZJI4 515 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CCNYL2Q5T2Q4 361 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CGB2Q6NT52 195 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TMEM205Q6UW68 189 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 QSOX2Q6ZRP7 698 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LANCL3Q6ZV70 420 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PAGE2Q7Z2X7 111 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CRLF3Q8IUI8 442 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 KIRREL3Q8IZU9 778 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C16orf78Q8WTQ4 265 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ANKRD9Q96BM1 317 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CRELD1Q96HD1 420 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 METTL2AQ96IZ6 378 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MAELQ96JY0 434 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EGLN2Q96KS0 407 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CCT7Q99832 543 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EFHD1Q9BUP0 239 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 WDR55Q9H6Y2 383 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 AKTIPQ9H8T0 292 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LYARQ9NX58 379 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 HEY2Q9UBP5 337 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PHF11Q9UIL8 331 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PADI2Q9Y2J8 665 aa11.67□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LOC102723996A0A087X1L8 192 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GLOD5A6NK44 160 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 K7ENP7 123 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MASP2O00187 686 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FGF17O60258 216 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SEC22BO75396 215 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 IL3P08700 152 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CD63P08962 238 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ANXA4P09525 319 aaPredicted RBP11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PRKAR1AP10644 381 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MMP11P24347 488 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PPP2R1BP30154 601 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EMP2P54851 167 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TRA2BP62995 288 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CDC20Q12834 499 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SSPNQ14714 243 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PRSS53Q2L4Q9 553 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms