RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 CXCR2P25025 360 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 AOAHP28039 575 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PCGF2P35227 344 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SUZ12Q15022 739 aaKnown RBP10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LRIF1Q5T3J3 769 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 VWA5B2Q8N398 1253 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LMNTD1Q8N9Z9 388 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ATP6V1C2Q8NEY4 427 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SNAPC3Q92966 411 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 RNF121Q9H920 327 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 RDH14Q9HBH5 336 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLC45A1Q9Y2W3 748 aa10.65□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SH3D21A4FU49 640 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 TMEM88BA6NKF7 163 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 RTCAO00442 366 aaKnown RBP10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 STATHP02808 62 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 GPX2P18283 190 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 HOXD10P28358 340 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 ANGPT1Q15389 498 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PLEKHS1Q5SXH7 462 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 OR52N2Q8NGI0 321 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 C2orf15Q8WU43 125 aaKnown RBP10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 OR2AG1Q9H205 316 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 P2RY12Q9H244 342 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 NEU3Q9UQ49 428 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SESN1Q9Y6P5 492 aa10.65□□□□□ -0.71
CSGALNACT1-202ENST00000397998 IRGMA1A4Y4 181 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 CHST10O43529 356 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SOCS5O75159 536 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 ALPPL2P10696 532 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 ERP29P30040 261 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SLC9A3P48764 834 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 CAV3P56539 151 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 RGS8P57771 180 aaPredicted RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 HBA1P69905 142 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 STX4Q12846 297 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PAMR1Q6UXH9 720 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 MTSS1LQ765P7 747 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 OR52L1Q8NGH7 329 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 DEDD2Q8WXF8 326 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 USP7Q93009 1102 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SLC35G5Q96KT7 338 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 FYTTD1Q96QD9 318 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 AIF1LQ9BQI0 150 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SIRT5Q9NXA8 310 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 COQ3Q9NZJ6 369 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 NDUFAF4Q9P032 175 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 GPR52Q9Y2T5 361 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 CFAP20Q9Y6A4 193 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 HMX3A6NHT5 357 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 RAB36O95755 333 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 CHMP24386 653 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 ETV3P41162 512 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SMSP52788 366 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 CDH11P55287 796 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 LMAN2Q12907 356 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 C11orf88Q6PI97 169 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 COMMD6Q7Z4G1 85 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 VN1R5Q7Z5H4 357 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 MEX3DQ86XN8 651 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 NPAS4Q8IUM7 802 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SMG7Q92540 1137 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 MS4A4AQ96JQ5 239 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 FAIM2Q9BWQ8 316 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 MCUBQ9NWR8 336 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 C5AR2Q9P296 337 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PCDHGB1Q9Y5G3 927 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 KLK4Q9Y5K2 254 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 TSPAN4O14817 238 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 WBP4O75554 376 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PCDH8O95206 1070 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 C4BPBP20851 252 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 AVPR1BP47901 424 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 CDC20Q12834 499 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SP140Q13342 867 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 BHLHB9Q6PI77 547 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 TMIGD1Q6UXZ0 262 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 GDPD4Q6W3E5 623 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PRR23CQ6ZRP0 262 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 BCDIN3DQ7Z5W3 292 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 FGD2Q7Z6J4 655 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 C10orf111Q8N326 155 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 NEIL3Q8TAT5 605 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 FOXJ1Q92949 421 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 ZBED6CLQ96FA7 236 aaPredicted RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 SNX18Q96RF0 628 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 OR51V1Q9H2C8 321 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PDFQ9HBH1 243 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 LHX3Q9UBR4 397 aa10.64□□□□□ -0.71
CSGALNACT1-202ENST00000397998 CPSF4LA6NMK7 179 aaKnown RBP10.63□□□□□ -0.71
CSGALNACT1-202ENST00000397998 ARHGEF33A8MVX0 844 aa10.63□□□□□ -0.71
CSGALNACT1-202ENST00000397998 CAPN5O15484 640 aaPredicted RBP10.63□□□□□ -0.71
CSGALNACT1-202ENST00000397998 OR1F1O43749 312 aa10.63□□□□□ -0.71
CSGALNACT1-202ENST00000397998 PIN1Q13526 163 aaPredicted RBP10.63□□□□□ -0.71
CSGALNACT1-202ENST00000397998 ARSIQ5FYB1 569 aa10.63□□□□□ -0.71
CSGALNACT1-202ENST00000397998 COX20Q5RI15 118 aa10.63□□□□□ -0.71
CSGALNACT1-202ENST00000397998 C22orf39Q6P5X5 142 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms