RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ACSM2AQ08AH3 577 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 PPIGQ13427 754 aaKnown RBP eCLIP15.29■□□□□ 0.047e-7■■■□□ 15.5
CHMP1A-201ENST00000397901 TP53BP2Q13625 1128 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 XKR6Q5GH73 641 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 ACSM2BQ68CK6 577 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 NAGSQ8N159 534 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 OR8J2Q8NGG1 315 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 NIPSNAP1Q9BPW8 284 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 NDUFAF4Q9P032 175 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 VPS29Q9UBQ0 182 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 CD84Q9UIB8 345 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 TSPAN4O14817 238 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 SEC14L5O43304 696 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 PCDH7O60245 1069 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 EFEMP2O95967 443 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 C8GP07360 202 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ALAS2P22557 587 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ETV1P50549 477 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 CDH12P55289 794 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 DSTNP60981 165 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 SPIBQ01892 262 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ST3GAL4Q11206 333 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 IKZF1Q13422 519 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 GALEQ14376 348 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF267Q14586 743 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 HKDC1Q2TB90 917 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 CDKL4Q5MAI5 379 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 RETSATQ6NUM9 610 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF605Q86T29 641 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 NLRP8Q86W28 1048 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ENKURQ8TC29 256 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 OVCA2Q8WZ82 227 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 MSANTD3Q96H12 275 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 DCLRE1CQ96SD1 692 aaKnown RBP15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 DOHHQ9BU89 302 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF226Q9NYT6 803 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC6A14Q9UN76 642 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 GCM2O75603 506 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 OR56A5P0C7T3 313 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 POU2F1P14859 743 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF250P15622 560 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 KIR2DL3P43628 341 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 HNMTP50135 292 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 PFN3P60673 137 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 RGS1Q08116 209 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ANGPT1Q15389 498 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 RGNQ15493 299 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 CPTPQ5TA50 214 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 CPA6Q8N4T0 437 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 FAM181AQ8N9Y4 354 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 HYLS1Q96M11 299 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 CHST8Q9H2A9 424 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ERVMER34-1Q9H9K5 563 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 ZC4H2Q9NQZ6 224 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 CLEC4EQ9ULY5 219 aa15.28■□□□□ 0.04
CHMP1A-201ENST00000397901 GABRR3A8MPY1 467 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 E7EQ34 232 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 BTN3A3O00478 584 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 SCAMP2O15127 329 aaKnown RBP15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 NDUFA2O43678 99 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 ETHE1O95571 254 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 CSF2P04141 144 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 CRATP43155 626 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 BAMBIQ13145 260 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 MAB21L1Q13394 359 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 TATDN3Q17R31 274 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 EXOC3L2Q2M3D2 409 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 DGKKQ5KSL6 1271 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 GARNL3Q5VVW2 1013 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC8B1Q6J4K2 584 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 C19orf48Q6RUI8 117 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF367Q7RTV3 350 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 TMC8Q8IU68 726 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 LGI4Q8N135 537 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 CBARPQ8N350 705 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 GPR156Q8NFN8 814 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 OR9Q2Q8NGE9 314 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 AP2M1Q96CW1 435 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 FCRL1Q96LA6 429 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF578Q96N58 590 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 ELF5Q9UKW6 265 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 PADI2Q9Y2J8 665 aa15.27■□□□□ 0.04
CHMP1A-201ENST00000397901 AGAP14A8MT82 685 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 TOR1AO14656 332 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 PRMT3O60678 531 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 HLA-EP13747 358 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 SERPINA4P29622 427 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 PSPHP78330 225 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 PLET1Q6UQ28 207 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 CCDC149Q6ZUS6 474 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 C1orf52Q8N6N3 182 aaKnown RBP15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 TRMT61AQ96FX7 289 aaKnown RBP15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 SCLYQ96I15 445 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 CCM2Q9BSQ5 444 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 IMPAD1Q9NX62 359 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 SH3BP4Q9P0V3 963 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 DUSP12Q9UNI6 340 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 RUVBL1Q9Y265 456 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms