RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CFL1P23528 166 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 DUOXA1Q1HG43 343 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 OR2AP1Q8NGE2 309 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 OR8J1Q8NGP2 316 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 DNAJA4Q8WW22 397 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 BRF2Q9HAW0 419 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 QPCTLQ9NXS2 382 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 LSM7Q9UK45 103 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 HS3ST2Q9Y278 367 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 PCDHB9Q9Y5E1 797 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 OR2AT4A6NND4 320 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SDC1P18827 310 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 IFI44LQ53G44 452 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 C9orf131Q5VYM1 1079 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 FAM122CQ6P4D5 195 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 COQ8BQ96D53 544 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 C7orf34Q96L11 122 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 CDADC1Q9BWV3 514 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 CPEB1Q9BZB8 566 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 TPT1P8Q9HAU6 139 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 BRD7Q9NPI1 651 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 MS4A12Q9NXJ0 267 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 A0A1B0GTL3 188 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SCAMP3O14828 347 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 CD160O95971 181 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 LCKP06239 509 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 RACK1P63244 317 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 DCST1Q5T197 706 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ANKRD54Q6NXT1 300 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 METTL4Q8N3J2 472 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 TRIM43Q96BQ3 446 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 OTUB2Q96DC9 234 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 TBX5Q99593 518 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 FUZQ9BT04 418 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ASB8Q9H765 288 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 RNF121Q9H920 327 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 INIPQ9NRY2 104 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 NLKQ9UBE8 527 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 NEUROG3Q9Y4Z2 214 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 PCDHB11Q9Y5F2 797 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ARVCFO00192 962 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SLC28A2O43868 658 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 NR2F1P10589 423 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 CKMT1AP12532 417 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 KELP23276 732 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 HTR1BP28222 390 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 PCGF2P35227 344 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 THPOP40225 353 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ARFIP1P53367 373 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 CAMK1Q14012 370 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ZMYND11Q15326 602 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 GPAT3Q53EU6 434 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 GPR155Q7Z3F1 870 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 OXR1Q8N573 874 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 CELF2-AS1Q8N7Q2 184 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 FRS2Q8WU20 508 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 RPL3LQ92901 407 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 KIAA1143Q96AT1 154 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 TEFMQ96QE5 360 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SLC39A1Q9NY26 324 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 HCN2Q9UL51 889 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 GLYATL1P3A0A0U1RQE8 302 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 METTL15A6NJ78 407 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 CLIC1O00299 241 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF432O94892 652 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SEMG1P04279 462 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 FAUP35544 74 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 GGT2P36268 569 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 OR1G1P47890 313 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 RPIAP49247 311 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 GP2P55259 537 aaKnown RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 BCL2L1Q07817 233 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ST3GAL4Q11206 333 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ADAM15Q13444 863 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 BCL7AQ4VC05 210 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SPIN4Q56A73 249 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 FUT10Q6P4F1 479 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 VASH1Q7L8A9 365 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF367Q7RTV3 350 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 FAM220AQ7Z4H9 259 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SERPINA9Q86WD7 417 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 PHACTR4Q8IZ21 702 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 GJD3Q8N144 294 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 FAM83FQ8NEG4 500 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 OR2T11Q8NH01 316 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 TEX37Q96LM6 180 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 FKBP14Q9NWM8 211 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 AKAP7Q9P0M2 348 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 LHX3Q9UBR4 397 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 PSORS1C1Q9UIG5 152 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 DNMT3AQ9Y6K1 912 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-205ENST00000397611 TRIP11Q15643 1979 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 ATP6V1G2-DDX39BF2Z307 99 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 STC2O76061 302 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 CPN2P22792 545 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 SHMT2P34897 504 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 LIMK1P53667 647 aa5.23□□□□□ -1.57
PTPRD-205ENST00000397611 HMGCS1Q01581 520 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms