RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 NCDNQ9UBB6 729 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 KLHL3Q9UH77 587 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 VPS4AQ9UN37 437 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 EXO1Q9UQ84 846 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 ENTPD4Q9Y227 616 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 LAMA1P25391 3075 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 TRBV5-3A0A0A0MS03 114 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 D6RAR5 112 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 CDX4O14627 284 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 OR2B3O76000 313 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 HBQ1P09105 142 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 CD1EP15812 388 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 CPN2P22792 545 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 LIM2P55344 173 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 PHC1P78364 1004 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 CEBPEQ15744 281 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 NANOGP8Q6NSW7 305 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 PSMA8Q8TAA3 256 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 ZCCHC10Q8TBK6 192 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 JADE3Q92613 823 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 ATOH1Q92858 354 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 MOAP1Q96BY2 351 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 ASB9Q96DX5 294 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 PAIP1Q9H074 479 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 NANOGQ9H9S0 305 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 SLC35C2Q9NQQ7 365 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 TEX10Q9NXF1 929 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 TAS2R9Q9NYW1 312 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 ZNF780BQ9Y6R6 833 aa18.01■□□□□ 0.47
TSPAN4-204ENST00000397404 RP1P56715 2156 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 A0A1W2PRB8 838 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 C4orf51C9J302 202 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 PRAMEF10O60809 474 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 BMP10O95393 424 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 MPIP34949 423 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 SLC7A2P52569 658 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 PCBP4P57723 403 aaKnown RBP18■□□□□ 0.47
TSPAN4-204ENST00000397404 RAB38P57729 211 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 CCDC6Q16204 474 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 AASDHQ4L235 1098 aaPredicted RBP18■□□□□ 0.47
TSPAN4-204ENST00000397404 RUNDC3AQ59EK9 446 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 BHLHB9Q6PI77 547 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 NAXDQ8IW45 347 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 SLC15A3Q8IY34 581 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 EFCAB3Q8N7B9 438 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 MACROD1Q9BQ69 325 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 SMOC1Q9H4F8 434 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 KCMF1Q9P0J7 381 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 AKAP7Q9P0M2 348 aaPredicted RBP18■□□□□ 0.47
TSPAN4-204ENST00000397404 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18■□□□□ 0.47
TSPAN4-204ENST00000397404 CD300AQ9UGN4 299 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 SLC7A8Q9UHI5 535 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 UTS2RQ9UKP6 389 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 FBXW2Q9UKT8 454 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 NAALAD2Q9Y3Q0 740 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 HCN4Q9Y3Q4 1203 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 ATG4BQ9Y4P1 393 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 PCDHGA1Q9Y5H4 931 aa18■□□□□ 0.47
TSPAN4-204ENST00000397404 IGHV5-10-1A0A0J9YXX1 117 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 A0A1W2PR48 441 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 TMEM150CB9EJG8 249 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 ANKRD65E5RJM6 399 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 H3BMH7 237 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 NVLO15381 856 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 AIFM1O95831 613 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 ABCB1P08183 1280 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 RNH1P13489 461 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 CD59P13987 128 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 ALDH9A1P49189 494 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 VAC14Q08AM6 782 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 RIPK1Q13546 671 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 TRIM25Q14258 630 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 DEFB110Q30KQ9 67 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 SLITRK4Q8IW52 837 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 FAM13CQ8NE31 585 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 PRSS33Q8NF86 280 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 TMEM125Q96AQ2 219 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 DPH2Q9BQC3 489 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 NDC1Q9BTX1 674 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 FGF21Q9NSA1 209 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 BTBD3Q9Y2F9 522 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 PCDHB14Q9Y5E9 798 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 ASXL3Q9C0F0 2248 aa17.99■□□□□ 0.47
TSPAN4-204ENST00000397404 A0A0G2JN53 185 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 KRT75O95678 551 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 MYF5P13349 255 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 HOXB9P17482 250 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 HOXB6P17509 224 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 SEPHS1P49903 392 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 MANFP55145 182 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 MC1RQ01726 317 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 IL11RAQ14626 422 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 SNAP47Q5SQN1 464 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 ZNF574Q6ZN55 896 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 ZNF595Q8IYB9 648 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 GOLM1Q8NBJ4 401 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 OR4A15Q8NGL6 344 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 DNAJB14Q8TBM8 379 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 ZNF501Q96CX3 271 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms