RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PLD3Q8IV08 490 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 OR2T12Q8NG77 320 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 OR8J2Q8NGG1 315 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 STARD8Q92502 1023 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 PPWD1Q96BP3 646 aaKnown RBP14.17□□□□□ -0.14
CAPN3-207ENST00000397200 TCTN2Q96GX1 697 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 SLC29A1Q99808 456 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 NT5DC2Q9H857 520 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 PDE7BQ9NP56 450 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 UBAP1Q9NZ09 502 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 SEMA5BQ9P283 1151 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.17□□□□□ -0.14
CAPN3-207ENST00000397200 MAPRE3Q9UPY8 281 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 MDC1Q14676 2089 aaKnown RBP14.17□□□□□ -0.14
CAPN3-207ENST00000397200 FOXE1O00358 373 aaPredicted RBP14.16□□□□□ -0.14
CAPN3-207ENST00000397200 SLC30A4O14863 429 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 PRAMEF10O60809 474 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 SCN2BO60939 215 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 ETHE1O95571 254 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 ANKRD34CP0C6C1 535 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 TRPC1P48995 793 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 SEPHS1P49903 392 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 WNT3P56703 355 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 RPS15AP62244 130 aaKnown RBP14.16□□□□□ -0.14
CAPN3-207ENST00000397200 RELAQ04206 551 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 SRSF11Q05519 484 aaKnown RBP14.16□□□□□ -0.14
CAPN3-207ENST00000397200 UGT8Q16880 541 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 GTDC1Q4AE62 458 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 SPIN4Q56A73 249 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 PHF19Q5T6S3 580 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 GALNT18Q6P9A2 607 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 RBM44Q6ZP01 1051 aaKnown RBP14.16□□□□□ -0.14
CAPN3-207ENST00000397200 CARM1Q86X55 608 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 KMT5CQ86Y97 462 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 TMEM132CQ8N3T6 1108 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 GALNT4Q8N4A0 578 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 CHTF18Q8WVB6 975 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 MIEF2Q96C03 454 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 EGLN2Q96KS0 407 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 CCDC74BQ96LY2 380 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 CIB1Q99828 191 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 ZFYVE21Q9BQ24 234 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 C9orf16Q9BUW7 83 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 SARGQ9BW04 601 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 ZNF768Q9H5H4 540 aaKnown RBP14.16□□□□□ -0.14
CAPN3-207ENST00000397200 SLC6A13Q9NSD5 602 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 FAM120CQ9NX05 1096 aaKnown RBP14.16□□□□□ -0.14
CAPN3-207ENST00000397200 TOR4AQ9NXH8 423 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 ZNF639Q9UID6 485 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 CDV3Q9UKY7 258 aaKnown RBP14.16□□□□□ -0.14
CAPN3-207ENST00000397200 PCDHB14Q9Y5E9 798 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 GMEB1Q9Y692 573 aa14.16□□□□□ -0.14
CAPN3-207ENST00000397200 A0A0J9YVX5 310 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ANKDD1BA6NHY2 528 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 MAGEB17A8MXT2 336 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 SOCS2O14508 198 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 TM4SF5O14894 197 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ACOX3O15254 700 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 CTSVO60911 334 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 PRSS23O95084 383 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 CDK4P11802 303 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 IL1RNP18510 177 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 BCL6P41182 706 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 KIR3DL1P43629 444 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 PHEXP78562 749 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 HSD11B2P80365 405 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ACSM2AQ08AH3 577 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 DDX39BQ13838 428 aaKnown RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ZC3H12BQ5HYM0 836 aaKnown RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 C6orf52Q5T4I8 152 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ACSM2BQ68CK6 577 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 FBXO42Q6P3S6 717 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 RNF44Q7L0R7 432 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ARHGAP22Q7Z5H3 698 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 GPR180Q86V85 440 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 SLITRK4Q8IW52 837 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 MICU2Q8IYU8 434 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 MFSD9Q8NBP5 474 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 TTLQ8NG68 377 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 HUS1BQ8NHY5 278 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 KLHL6Q8WZ60 621 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 POP5Q969H6 163 aaKnown RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 MYCBPQ99417 103 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 MTERF1Q99551 399 aaKnown RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 INPP5KQ9BT40 448 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 CHRNA10Q9GZZ6 450 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ZNF696Q9H7X3 374 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 PILRAQ9UKJ1 303 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 SPAARA0A1B0GVQ0 90 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ELOVL7A1L3X0 281 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 DLGAP1O14490 977 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 LCMT2O60294 686 aaKnown RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 SCELO95171 688 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ZCCHC18P0CG32 403 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 SMIM18P0DKX4 95 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 NELFEP18615 380 aaKnown RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 GSTM2P28161 218 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 SERPINB1P30740 379 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ASMTP46597 345 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 PLIN5Q00G26 463 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms