RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ZNF793Q6ZN11 406 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 ZC3H7AQ8IWR0 971 aaKnown RBP14.21□□□□□ -0.13
CBX3-202ENST00000396386 MFSD9Q8NBP5 474 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 PIK3C3Q8NEB9 887 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 TSACCQ96A04 125 aaPredicted RBP14.21□□□□□ -0.13
CBX3-202ENST00000396386 RIBC2Q9H4K1 309 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 ACSS1Q9NUB1 689 aaPredicted RBP14.21□□□□□ -0.13
CBX3-202ENST00000396386 EHD3Q9NZN3 535 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 C5AR2Q9P296 337 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 RSL24D1Q9UHA3 163 aaKnown RBP14.21□□□□□ -0.13
CBX3-202ENST00000396386 PCOLCE2Q9UKZ9 415 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 SNX7Q9UNH6 387 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 ADAMDEC1O15204 470 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 ERI3O43414 337 aaKnown RBP14.21□□□□□ -0.14
CBX3-202ENST00000396386 MITFO75030 526 aaPredicted RBP14.21□□□□□ -0.14
CBX3-202ENST00000396386 UGT2B11O75310 529 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 RASGRP1O95267 797 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 STATHP02808 62 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 IL7RP16871 459 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 BMP8BP34820 402 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 DAPP51397 102 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 RPS6KA3P51812 740 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 PCBP3P57721 371 aaKnown RBP14.21□□□□□ -0.14
CBX3-202ENST00000396386 YPEL5P62699 121 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 TMEM31Q5JXX7 168 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 NDUFAF5Q5TEU4 345 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 KIAA1614Q5VZ46 1190 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 ZNF425Q6IV72 752 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 ZNF773Q6PK81 442 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 CEACAM20Q6UY09 585 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 GALNT5Q7Z7M9 940 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 CYP4Z1Q86W10 505 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 AMER3Q8N944 861 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 SETD9Q8NE22 299 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 CHDHQ8NE62 594 aaPredicted RBP14.21□□□□□ -0.14
CBX3-202ENST00000396386 ZFAND2BQ8WV99 257 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 HMGB4Q8WW32 186 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 TMIGD2Q96BF3 282 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 MS4A6EQ96DS6 147 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 MSANTD3Q96H12 275 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 KCNC2Q96PR1 638 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 ZNF347Q96SE7 839 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 NPLQ9BXD5 320 aaPredicted RBP14.21□□□□□ -0.14
CBX3-202ENST00000396386 KLHL31Q9H511 634 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 LTB4R2Q9NPC1 389 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 A4GALTQ9NPC4 353 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 THSD1Q9NS62 852 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 SIRT3Q9NTG7 399 aaPredicted RBP14.21□□□□□ -0.14
CBX3-202ENST00000396386 ZSCAN32Q9NX65 697 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 BLOC1S6Q9UL45 172 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 PCDHGA8Q9Y5G5 932 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 PCDHGA4Q9Y5G9 962 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 DGKBQ9Y6T7 804 aa14.21□□□□□ -0.14
CBX3-202ENST00000396386 H3BQ06 376 aaPredicted RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 H3BSA7 217 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 SOX1O00570 391 aaPredicted RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 GUCY1B2O75343 617 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 JRKO75564 520 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 SEMA4FO95754 770 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 HOXB3P14651 431 aaPredicted RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 GLULP15104 373 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 EEF1B2P24534 225 aaKnown RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 NTSP30990 170 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 RRM2P31350 389 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 CDK9P50750 372 aaKnown RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 GABARAPL2P60520 117 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 SRP54P61011 504 aaKnown RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 IL1RL1Q01638 556 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 HYAL2Q12891 473 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 TOP3AQ13472 1001 aaPredicted RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 CCINQ13939 588 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 SLC9A5Q14940 896 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 MLC1Q15049 377 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 ZBED5Q49AG3 693 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 FAHD1Q6P587 224 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 ALDH16A1Q8IZ83 802 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 ATG16L2Q8NAA4 619 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 OR2L5Q8NG80 312 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 OR4E2Q8NGC2 313 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 GEMIN6Q8WXD5 167 aaKnown RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 TMEM168Q9H0V1 697 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 ADNPQ9H2P0 1102 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 SLC24A3Q9HC58 644 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 KRT84Q9NSB2 600 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 TAS2R7Q9NYW3 318 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 ZNF624Q9P2J8 865 aaPredicted RBP14.2□□□□□ -0.14
CBX3-202ENST00000396386 PCDHGB3Q9Y5G1 929 aa14.2□□□□□ -0.14
CBX3-202ENST00000396386 CUL9Q8IWT3 2517 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 MDC1Q14676 2089 aaKnown RBP14.19□□□□□ -0.14
CBX3-202ENST00000396386 C4orf51C9J302 202 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 C5orf58C9J3I9 102 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 M0QX08 132 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 PPM1DO15297 605 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 SH3BP5O60239 455 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 ITGA2P17301 1181 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 HIST1H1TP22492 207 aaPredicted RBP14.19□□□□□ -0.14
CBX3-202ENST00000396386 CRHBPP24387 322 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 RYKP34925 604 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 CD47Q08722 323 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 KEAP1Q14145 624 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms