RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ASB4Q9Y574 426 aa14.59□□□□□ -0.07
VAMP1-202ENST00000396308 PCDHA9Q9Y5H5 950 aa14.59□□□□□ -0.07
VAMP1-202ENST00000396308 ZNF780BQ9Y6R6 833 aa14.59□□□□□ -0.07
VAMP1-202ENST00000396308 CFAP54Q96N23 3096 aa14.59□□□□□ -0.07
VAMP1-202ENST00000396308 A0A096LPI6 279 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 A0A0A6YYC8 382 aaPredicted RBP14.58□□□□□ -0.08
VAMP1-202ENST00000396308 PRSS51A0A1B0GVH4 220 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 EFCAB7A8K855 629 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 H0YHG0 523 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 I3L1I5 382 aaPredicted RBP14.58□□□□□ -0.08
VAMP1-202ENST00000396308 DSCR3O14972 297 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 CIB2O75838 187 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 LAMP1P11279 417 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 PIM1P11309 404 aaPredicted RBP14.58□□□□□ -0.08
VAMP1-202ENST00000396308 CCKBRP32239 447 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 PGM1P36871 562 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 TRPC1P48995 793 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 LIM2P55344 173 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 MC1RQ01726 317 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 DMTNQ08495 405 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 TLR1Q15399 786 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 C6orf163Q5TEZ5 329 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 ANKRD26P1Q6NSI1 321 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 RIPOR1Q6ZS17 1223 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 ASRGL1Q7L266 308 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 PPP1R3BQ86XI6 285 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 KIF2BQ8N4N8 673 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 OR4A15Q8NGL6 344 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 EXOSC8Q96B26 276 aaKnown RBP14.58□□□□□ -0.08
VAMP1-202ENST00000396308 ZNF501Q96CX3 271 aaPredicted RBP14.58□□□□□ -0.08
VAMP1-202ENST00000396308 LRRC58Q96CX6 371 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 BBS4Q96RK4 519 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 CMKLR1Q99788 373 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 ADA2Q9NZK5 511 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 UTS2RQ9UKP6 389 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 VPS4AQ9UN37 437 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 MAN2B2Q9Y2E5 1009 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 AP3M1Q9Y2T2 418 aa14.58□□□□□ -0.08
VAMP1-202ENST00000396308 MRPS2Q9Y399 296 aaKnown RBP14.58□□□□□ -0.08
VAMP1-202ENST00000396308 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.58□□□□□ -0.08
VAMP1-202ENST00000396308 NUP210LQ5VU65 1888 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 ASCC3Q8N3C0 2202 aaKnown RBP14.57□□□□□ -0.08
VAMP1-202ENST00000396308 A0A1B0GX78 115 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 A0A1W2PR48 441 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 SGK494L7N484 410 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 PROM1O43490 865 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 STAMBPO95630 424 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 B3GALT4O96024 378 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 ALAS2P22557 587 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 CPOXP36551 454 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 HNRNPFP52597 415 aaKnown RBP14.57□□□□□ -0.08
VAMP1-202ENST00000396308 LIMK1P53667 647 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 PSME3P61289 254 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 OLR1P78380 273 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 SHC2P98077 582 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 ZFP36L1Q07352 338 aaKnown RBP14.57□□□□□ -0.08
VAMP1-202ENST00000396308 IL11RAQ14626 422 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 TRIP6Q15654 476 aaKnown RBP14.57□□□□□ -0.08
VAMP1-202ENST00000396308 SLC48A1Q6P1K1 146 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 DNAJC14Q6Y2X3 702 aaPredicted RBP14.57□□□□□ -0.08
VAMP1-202ENST00000396308 TTLL10Q6ZVT0 673 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 PRSS41Q7RTY9 318 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 RETREG3Q86VR2 466 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 KIAA2013Q8IYS2 634 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 CA13Q8N1Q1 262 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 AMER3Q8N944 861 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 FAM47BQ8NA70 645 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 CCDC115Q96NT0 180 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 DEPDC7Q96QD5 511 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 THTPAQ9BU02 230 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 RPF2Q9H7B2 306 aaKnown RBP14.57□□□□□ -0.08
VAMP1-202ENST00000396308 NEUROD4Q9HD90 331 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 SLC52A3Q9NQ40 469 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 ATG4BQ9Y4P1 393 aa14.57□□□□□ -0.08
VAMP1-202ENST00000396308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 A0A1W2PRB8 838 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 ASPDHA6ND91 283 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 CLDN4O14493 209 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 GSC2O15499 205 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 ZNF749O43361 778 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 ERAL1O75616 437 aaKnown RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 SCRG1O75711 98 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 CPSF4O95639 269 aaKnown RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 NQO1P15559 274 aaKnown RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 FBLP22087 321 aaKnown RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 PPIBP23284 216 aaKnown RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 GPC1P35052 558 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 MANFP55145 182 aaKnown RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 PLIN5Q00G26 463 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 RUNX2Q13950 521 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 PAGE3Q5JUK9 113 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 SAMD4BQ5PRF9 694 aaKnown RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 GLRX5Q86SX6 157 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 PIP4P1Q86T03 277 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 ANKRD46Q86W74 232 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 PDSS2Q86YH6 399 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 ARHGEF39Q8N4T4 335 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 FBXO27Q8NI29 283 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 GTF2H4Q92759 462 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 TANKQ92844 425 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms