RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TAF7Q15545 349 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR1C1Q15619 314 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 C3AR1Q16581 482 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 GPAT3Q53EU6 434 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 TMEM26Q6ZUK4 368 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 Q6ZVQ6 151 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 BNIPLQ7Z465 357 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC22A16Q86VW1 577 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 TMEM178AQ8NBL3 297 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 IPMKQ8NFU5 416 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR10V1Q8NGI7 309 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR10G8Q8NGN5 311 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 GANCQ8TET4 914 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 SMAP2Q8WU79 429 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 P3H4Q92791 437 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 SYAP1Q96A49 352 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 OMA1Q96E52 524 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF486Q96H40 463 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 IL12RB2Q99665 862 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 FUNDC2Q9BWH2 189 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 FTHL17Q9BXU8 183 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 WWP1Q9H0M0 922 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 ATG10Q9H0Y0 220 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 CXXC4Q9H2H0 198 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 XPO7Q9UIA9 1087 aaKnown RBP4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 DIMT1Q9UNQ2 313 aaKnown RBP4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 UMODL1Q5DID0 1318 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 IGHV4-4A0A075B6R2 117 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 IGKV2D-30A0A075B6S6 120 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 NKX6-3A6NJ46 265 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 SHISA7A6NL88 538 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 EEF2KO00418 725 aaKnown RBP4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 NDC80O14777 642 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 EML2O95834 649 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 PROS1P07225 676 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 PKLRP30613 574 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 MAP2K2P36507 400 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 FEN1P39748 380 aaKnown RBP4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 LIMK2P53671 638 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 SSTP61278 116 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 TRA2BP62995 288 aaKnown RBP4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 PMP22Q01453 160 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 PRKCEQ02156 737 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 PDIA5Q14554 519 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 EXOSC7Q15024 291 aaKnown RBP4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF528Q3MIS6 628 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 HSP90AB3PQ58FF7 597 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 CMPK2Q5EBM0 449 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 FFAR4Q5NUL3 377 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 STPG1Q5TH74 334 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 NBPF5PQ86XG9 351 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 NIPA2Q8N8Q9 360 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCDC197Q8NCU1 140 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR6M1Q8NGM8 313 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCDC110Q8TBZ0 833 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 DPH5Q9H2P9 285 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 TMEM231Q9H6L2 316 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 COQ10BQ9H8M1 238 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 MARCH7Q9H992 704 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 VIPAS39Q9H9C1 493 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC35D1Q9NTN3 355 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 CGNQ9P2M7 1197 aaKnown RBP4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 ANKMY1Q9P2S6 941 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 TEKT2Q9UIF3 430 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 MRTO4Q9UKD2 239 aaKnown RBP4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 PLCL2Q9UPR0 1127 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 ATG4BQ9Y4P1 393 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 ANGPTL3Q9Y5C1 460 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZMYM6O95789 1325 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 ARID2Q68CP9 1835 aa4.35□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC1A7O00341 560 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 GRID2O43424 1007 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 KRT86O43790 486 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 LMX1BO60663 402 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 CAVIN2O95810 425 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 AK1P00568 194 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 PRSS1P07477 247 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 GSTA2P09210 222 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 C4BPBP20851 252 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCKARP32238 428 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 MDH1P40925 334 aaKnown RBP4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 GUCY2DQ02846 1103 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 GABPB1Q06547 395 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 HSPA14Q0VDF9 509 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 TMED1Q13445 227 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 KRT81Q14533 505 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 TRADDQ15628 312 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 TAB1Q15750 504 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 CARTPTQ16568 116 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 AGKQ53H12 422 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 LIPKQ5VXJ0 399 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 LIPJQ5W064 366 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 FAM159AQ6UWV7 190 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 CDHR3Q6ZTQ4 885 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 RFPL4BQ6ZWI9 263 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 PTAR1Q7Z6K3 402 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 ITIH5Q86UX2 942 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 EGFL6Q8IUX8 553 aa4.34□□□□□ -1.71
HMGB1P10-201ENST00000395823 LRRC17Q8N6Y2 441 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms