RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 STAG3L4Q8TBR4 150 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 PTPMT1Q8WUK0 201 aaPredicted RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 SORBS1Q9BX66 1292 aaKnown RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 RAB17Q9H0T7 212 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 NMRAL1Q9HBL8 299 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 DEPPQ9NTK1 212 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 MRPS33Q9Y291 106 aaKnown RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 KLF13Q9Y2Y9 288 aaPredicted RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 PINLYPA6NC86 204 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 C19orf84I3L1E1 186 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 K7EPI3 171 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 SAP18O00422 153 aaKnown RBP16.76■□□□□ 0.27
CXCL12-204ENST00000395793 PEX1O43933 1283 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 SCELO95171 688 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 TGFB1P01137 390 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 LTA4HP09960 611 aaKnown RBP16.76■□□□□ 0.27
CXCL12-204ENST00000395793 ESRRAP11474 423 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-204ENST00000395793 ABOP16442 354 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 STX2P32856 288 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 SLC7A5Q01650 507 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 ID2Q02363 134 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 CAV1Q03135 178 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 PCDH1Q08174 1060 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 CMPK2Q5EBM0 449 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 C3P1Q6ZMU1 363 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 TBC1D1Q86TI0 1168 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-204ENST00000395793 DOLPP1Q86YN1 238 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 TMEM156Q8N614 296 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 ACOT4Q8N9L9 421 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 OR7G3Q8NG95 312 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 AGAP11Q8TF27 550 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 KCNC2Q96PR1 638 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 ALOXE3Q9BYJ1 711 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 LYRM4Q9HD34 91 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 ZDHHC18Q9NUE0 388 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 VTI1BQ9UEU0 232 aa16.76■□□□□ 0.27
CXCL12-204ENST00000395793 A0A0G2JMM0 328 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 A0A1W2PPB8 328 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 A0A1W2PRS3 328 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 LRRC14BA6NHZ5 514 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 KIR3DP1A8MWS1 328 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 HS6ST1O60243 411 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 ZNF354AO60765 605 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-204ENST00000395793 OR2J2O76002 312 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 ZFAND5O76080 213 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 OR6B1O95007 311 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 IFNA16P05015 189 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 SNRPB2P08579 225 aaKnown RBP16.75■□□□□ 0.27
CXCL12-204ENST00000395793 PCNAP12004 261 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 CRABP2P29373 138 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 HPDP32754 393 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-204ENST00000395793 SSR4P51571 173 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 HK2P52789 917 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 NAB1Q13506 487 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 HIST2H2ACQ16777 129 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-204ENST00000395793 HIST2H2AA3Q6FI13 130 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 MED27Q6P2C8 311 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 XKRXQ6PP77 449 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 TMEM132CQ8N3T6 1108 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 ZFP62Q8NB50 900 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-204ENST00000395793 POGLUT1Q8NBL1 392 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 C16orf52Q8NHV5 167 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 ANKRD9Q96BM1 317 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-204ENST00000395793 MRRFQ96E11 262 aaKnown RBP16.75■□□□□ 0.27
CXCL12-204ENST00000395793 RASL10BQ96S79 203 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 DMRTA2Q96SC8 542 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 TBCDQ9BTW9 1192 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 OR51B5Q9H339 312 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 OPTCQ9UBM4 332 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 YARS2Q9Y2Z4 477 aaKnown RBP16.75■□□□□ 0.27
CXCL12-204ENST00000395793 HRH3Q9Y5N1 445 aa16.75■□□□□ 0.27
CXCL12-204ENST00000395793 DNAJC13O75165 2243 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 WWP2O00308 870 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 TFECO14948 347 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-204ENST00000395793 ETHE1O95571 254 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 HIST1H1TP22492 207 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-204ENST00000395793 SOX3P41225 446 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 TGM3Q08188 693 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 NAA30Q147X3 362 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-204ENST00000395793 GRHL2Q6ISB3 625 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 TEX9Q8N6V9 391 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 PSD4Q8NDX1 1056 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 SLC2A12Q8TD20 617 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 OR8D2Q9GZM6 311 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 SNX15Q9NRS6 342 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 MYOTQ9UBF9 498 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 CLCA3PQ9Y6N3 262 aa16.74■□□□□ 0.27
CXCL12-204ENST00000395793 PDZD2O15018 2839 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 A0A1B0GTH9 108 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 C17orf105B2RV13 164 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 KLRC4-KLRK1H3BQV0 150 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 FGF17O60258 216 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 C2P06681 752 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 AGAP20933 346 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 SSR2P43308 183 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 SMSP52788 366 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 IGLV3-21P80748 117 aaPredicted RBP16.73■□□□□ 0.27
CXCL12-204ENST00000395793 STX4Q12846 297 aa16.73■□□□□ 0.27
CXCL12-204ENST00000395793 DDX39BQ13838 428 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms