RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TSFMP43897 325 aaKnown RBP15.55■□□□□ 0.08
CXCL1-201ENST00000395761 HNRNPH2P55795 449 aaKnown RBP15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CHI3L2Q15782 390 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CES4AQ5XG92 561 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 QSOX2Q6ZRP7 698 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 RGS9BPQ6ZS82 235 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CPEB2Q7Z5Q1 589 aaKnown RBP15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CUZD1Q86UP6 607 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 METTL4Q8N3J2 472 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 GALNT16Q8N428 558 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CLEC1AQ8NC01 280 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 LSM14AQ8ND56 463 aaKnown RBP15.55■□□□□ 0.08
CXCL1-201ENST00000395761 FDCSPQ8NFU4 85 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 ZNF75CPQ92670 426 aaPredicted RBP15.55■□□□□ 0.08
CXCL1-201ENST00000395761 WDR77Q9BQA1 342 aaPredicted RBP15.55■□□□□ 0.08
CXCL1-201ENST00000395761 MANSC1Q9H8J5 431 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 BRF2Q9HAW0 419 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 PRDM9Q9NQV7 894 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 ZNF71Q9NQZ8 489 aaPredicted RBP15.55■□□□□ 0.08
CXCL1-201ENST00000395761 PRTFDC1Q9NRG1 225 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 ATG4BQ9Y4P1 393 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CLDN16Q9Y5I7 305 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 NUP210LQ5VU65 1888 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 IGKV3D-11A0A0A0MRZ8 115 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 NSG1A0A0A6YYJ2 146 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 MYOCOSA0A1B0GUC4 107 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 TMEM114B3SHH9 223 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 MKRN2OSH3BPM6 223 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 PCDH17O14917 1159 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 SEC24DO94855 1032 aaPredicted RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 SNUPNO95149 360 aaKnown RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 PDGFAP04085 211 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 PRB1P04280 392 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 KLK1P06870 262 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 CELA2AP08217 269 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 NEFHP12036 1026 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 BGNP21810 368 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 CPN2P22792 545 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 MDH1P40925 334 aaKnown RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 HMGCS1Q01581 520 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 TBL3Q12788 808 aaKnown RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 AIMP2Q13155 320 aaKnown RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 STX3Q13277 289 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 SFT2D3Q587I9 215 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 ARL13AQ5H913 290 aaPredicted RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 ATG16L1Q676U5 607 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 C18orf63Q68DL7 685 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 CLEC6AQ6EIG7 209 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 MRM1Q6IN84 353 aaKnown RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 MTERF4Q7Z6M4 381 aaKnown RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 CLNKQ7Z7G1 428 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 GPR180Q86V85 440 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 NUDT13Q86X67 352 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 SCUBE1Q8IWY4 988 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 PPP1R14CQ8TAE6 165 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 DYDC1Q8WWB3 177 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 VPS50Q96JG6 964 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 IMMP1LQ96LU5 166 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 MAGEB18Q96M61 343 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 SLC25A23Q9BV35 468 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 NUDT9Q9BW91 350 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 ACPTQ9BZG2 426 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 AHSPQ9NZD4 102 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 C19orf25Q9UFG5 118 aaPredicted RBP15.54■□□□□ 0.08
CXCL1-201ENST00000395761 TUBD1Q9UJT1 453 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 MMACHCQ9Y4U1 282 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 ASB4Q9Y574 426 aa15.54■□□□□ 0.08
CXCL1-201ENST00000395761 CLDN4O14493 209 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 PRKRAO75569 313 aaKnown RBP15.53■□□□□ 0.08
CXCL1-201ENST00000395761 CRCPO75575 148 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 FAM58BPP0C7Q3 252 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 UROSP10746 265 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 HSD3B1P14060 373 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 ITGA3P26006 1051 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 HSD3B2P26439 372 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 TPP2P29144 1249 aaPredicted RBP15.53■□□□□ 0.08
CXCL1-201ENST00000395761 HSD17B7P56937 341 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 SOX8P57073 446 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 OR4D2P58180 307 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 CSTF3Q12996 717 aaKnown RBP15.53■□□□□ 0.08
CXCL1-201ENST00000395761 SLC13A2Q13183 592 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 RCN2Q14257 317 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 CYP20A1Q6UW02 462 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 COMMD6Q7Z4G1 85 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 ZNF595Q8IYB9 648 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 EFCAB3Q8N7B9 438 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 C9orf43Q8TAL5 461 aaPredicted RBP15.53■□□□□ 0.08
CXCL1-201ENST00000395761 ADAMTS18Q8TE60 1221 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 CHTF18Q8WVB6 975 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 UCN3Q969E3 161 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 CCDC134Q9H6E4 229 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 THAP1Q9NVV9 213 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 VPS29Q9UBQ0 182 aa15.53■□□□□ 0.08
CXCL1-201ENST00000395761 MRPS33Q9Y291 106 aaKnown RBP15.53■□□□□ 0.08
CXCL1-201ENST00000395761 A0A1W2PR48 441 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 TCRBV16S1A1N1A0A5B0 115 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 SERTM1A2A2V5 107 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 WASHC1A8K0Z3 465 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 A8MUA0 341 aa15.52■□□□□ 0.08
CXCL1-201ENST00000395761 TMEM233B4DJY2 109 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms