RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 YIF1BQ5BJH7 314 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 GCNT6Q5T4J0 391 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 PRR23CQ6ZRP0 262 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 SLC24A5Q71RS6 500 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 PDZD3Q86UT5 571 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 THOC6Q86W42 341 aaKnown RBP13.68□□□□□ -0.22
CLIP2-203ENST00000395060 GHDCQ8N2G8 530 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 GALNT9Q9HCQ5 603 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 GRIP1Q9Y3R0 1128 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 ALG5Q9Y673 324 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 PLA2G10O15496 165 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 MRPS14O60783 128 aaKnown RBP13.67□□□□□ -0.22
CLIP2-203ENST00000395060 RAE1P78406 368 aaKnown RBP13.67□□□□□ -0.22
CLIP2-203ENST00000395060 IL18Q14116 193 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 BRAT1Q6PJG6 821 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 CRTC1Q6UUV9 634 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 OR4C15Q8NGM1 316 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 OTULINQ96BN8 352 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 ACAT2Q9BWD1 397 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 MN1Q10571 1320 aaPredicted RBP13.67□□□□□ -0.22
CLIP2-203ENST00000395060 CDH23Q9H251 3354 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 C1orf226A1L170 272 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 ZNF840PA6NDX5 716 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 FADS2P1A8MWK0 482 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 FAM25AB3EWG3 89 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 FAM25CB3EWG5 89 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 FAM25GB3EWG6 89 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 JUPP14923 745 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 IDSP22304 550 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 INPP1P49441 399 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 TRIQKQ629K1 86 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 ZNF57Q68EA5 555 aaPredicted RBP13.67□□□□□ -0.22
CLIP2-203ENST00000395060 CASP12Q6UXS9 341 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 MACC1Q6ZN28 852 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 LRRC70Q7Z2Q7 622 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 VWA5B2Q8N398 1253 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 C19orf18Q8NEA5 215 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 RAD9AQ99638 391 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 PIP5K1AQ99755 562 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 WACQ9BTA9 647 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 ZDHHC6Q9H6R6 413 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 TMPRSS11EQ9UL52 423 aa13.67□□□□□ -0.22
CLIP2-203ENST00000395060 RUVBL1Q9Y265 456 aaKnown RBP13.67□□□□□ -0.22
CLIP2-203ENST00000395060 FAM240BA0A1B0GVZ2 78 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 SCG5P05408 212 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 BCHEP06276 602 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ALDH9A1P49189 494 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ATN1P54259 1190 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 LIM2P55344 173 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 RPS25P62851 125 aaKnown RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 TLE2Q04725 743 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ZNF91Q05481 1191 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 C2orf80Q0P641 193 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 FAPQ12884 760 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 TARDBPQ13148 414 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ASB18Q6ZVZ8 466 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 RNF180Q86T96 592 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 SIMC1Q8NDZ2 872 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 OR8J2Q8NGG1 315 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 WDR48Q8TAF3 677 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 UBTD2Q8WUN7 234 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ASB11Q8WXH4 323 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 TRIM45Q9H8W5 580 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 TBC1D17Q9HA65 648 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ASAH2Q9NR71 780 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 TXNL4BQ9NX01 149 aaKnown RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ARHGEF9O43307 516 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 HPGDSO60760 199 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ZNF780AO75290 641 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 OR2B3O76000 313 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 OR56A5P0C7T3 313 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 LHCGRP22888 699 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 PCGF2P35227 344 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 CD79BP40259 229 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 EIF4HQ15056 248 aaKnown RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 SIGIRRQ6IA17 410 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 PHC2Q8IXK0 858 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 OR8H1Q8NGG4 311 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 OR52P1PQ8NH57 321 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 KLHL6Q8WZ60 621 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ART5Q96L15 291 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 NELL2Q99435 816 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 TMCC3Q9ULS5 477 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ANKDD1BA6NHY2 528 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 FFAR1O14842 300 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 NTN1O95631 604 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 SLC16A8O95907 504 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 SLC2A2P11168 524 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 RPS3P23396 243 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 OR3A3P47888 321 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 AVPR1BP47901 424 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 TRIM71Q2Q1W2 868 aaKnown RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 CCSAPQ6IQ19 270 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 FAM9CQ8IZT9 166 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 PCSK9Q8NBP7 692 aaKnown RBP13.66□□□□□ -0.22
CLIP2-203ENST00000395060 FAM46DQ8NEK8 389 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 DBF4BQ8NFT6 615 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 NRTNQ99748 197 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 TMED9Q9BVK6 235 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms