RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SCMH1Q96GD3 660 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 GMLQ99445 158 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 NTPCRQ9BSD7 190 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 POLR2J2Q9GZM3 115 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 MCOLN1Q9GZU1 580 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 GABARAPL1Q9H0R8 117 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 REEP1Q9H902 201 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 TSPAN16Q9UKR8 245 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 MAGEA2P43356 314 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 TKTL1P51854 596 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 CSNK2BP67870 215 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 GRM1Q13255 1194 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 ANKRD39Q53RE8 183 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 MCATQ8IVS2 390 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 TPD52L3Q96J77 140 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 IL4I1Q96RQ9 567 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 FEVQ99581 238 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 FICDQ9BVA6 458 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 CPEB1Q9BZB8 566 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 KCNK12Q9HB15 430 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 RNF146Q9NTX7 359 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 STUB1Q9UNE7 303 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 HAS3O00219 553 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 CSO75390 466 aaKnown RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 CCNDBP1O95273 360 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 FGF4P08620 206 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 FBP1P09467 338 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 CBSLP0DN79 551 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 COX5BP10606 129 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 NR2C1P13056 603 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 PAICSP22234 425 aaKnown RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 NOS2P35228 1153 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 CBSP35520 551 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 CCR6P51684 374 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 FOXK2Q01167 660 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 GUCA2BQ16661 112 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 PLA1AQ53H76 456 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 HECTD2Q5U5R9 776 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 GPR142Q7Z601 462 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 SERINC5Q86VE9 423 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 PUSL1Q8N0Z8 303 aaKnown RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 OXR1Q8N573 874 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 OR14A16Q8NHC5 309 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 NDRG1Q92597 394 aaKnown RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 NELL1Q92832 810 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 AKT1S1Q96B36 256 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 KATNB1Q9BVA0 655 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 PRR14Q9BWN1 585 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 GBA2Q9HCG7 927 aaPredicted RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 POLE3Q9NRF9 147 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 PLCXD1Q9NUJ7 323 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 MPP6Q9NZW5 540 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 ZNF638Q14966 1978 aaKnown RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 CENPFP49454 3210 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 HYKKA2RU49 373 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 ARGFXA6NJG6 315 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 DBX1A6NMT0 343 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 SUPT3HB4E1H0 165 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 DISC1C4P0D8 188 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 E9PI62 339 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 ICOSLGO75144 302 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 SEMA7AO75326 666 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 JCHAINP01591 159 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 HLA-DQB1P01920 261 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 SCG5P05408 212 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 DRD5P21918 477 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 TSPAN7P41732 249 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 RABGGTBP53611 331 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 RNF4P78317 190 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 PITX1P78337 314 aaPredicted RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 RBBP7Q16576 425 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 NTRK2Q16620 822 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 GCNT6Q5T4J0 391 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 KCTD11Q693B1 232 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 C4orf19Q8IY42 314 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 OR8J3Q8NGG0 315 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 HSD17B8Q92506 261 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 HGDQ93099 445 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 TSNAXQ99598 290 aaKnown RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 KCNJ15Q99712 375 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 BRINP2Q9C0B6 783 aa12□□□□□ -0.49
SLC28A1-203ENST00000394573 AGO4Q9HCK5 861 aaKnown RBP12□□□□□ -0.49
SLC28A1-203ENST00000394573 FABP3P05413 133 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 H2AFB1P0C5Y9 115 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 H2AFB2P0C5Z0 115 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 TFPIP10646 304 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 HTR6P50406 440 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 ACTR1AP61163 376 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 SIM1P81133 766 aaPredicted RBP11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 MTMR1Q13613 665 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 NR6A1Q15406 480 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 MAPKAPK3Q16644 382 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 DUOXA2Q1HG44 320 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 CD276Q5ZPR3 534 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 HSD17B13Q7Z5P4 300 aaPredicted RBP11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 BCDIN3DQ7Z5W3 292 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 PDZD9Q8IXQ8 264 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 KLHL36Q8N4N3 616 aa11.99□□□□□ -0.49
SLC28A1-203ENST00000394573 RXFP4Q8TDU9 374 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms