RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PRAMEF13Q5VWM6 474 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 ALG1LQ6GMV1 187 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 THOC7Q6I9Y2 204 aaKnown RBP15.44■□□□□ 0.06
PCDH1-203ENST00000394536 FRMPD2BQ6IN97 320 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 BRAT1Q6PJG6 821 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 CCDC149Q6ZUS6 474 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 DENND6BQ8NEG7 585 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 SLC5A11Q8WWX8 675 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 TMEM80Q96HE8 168 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 BCL7BQ9BQE9 202 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 TMEM175Q9BSA9 504 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 TTLL2Q9BWV7 592 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 SERHL2Q9H4I8 314 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 GPR52Q9Y2T5 361 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 FGBP02675 491 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 EIF2S1P05198 315 aaKnown RBP15.44■□□□□ 0.06
PCDH1-203ENST00000394536 ZDHHC11BP0C7U3 371 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 CCNYL3P0C7X3 344 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 TNFSF8P32971 234 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 AVPR1BP47901 424 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 IFITM3Q01628 133 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 KCNC4Q03721 635 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 NFE2L1Q14494 772 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 CEP78Q5JTW2 689 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.44■□□□□ 0.06
PCDH1-203ENST00000394536 CHPFQ8IZ52 775 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 CBARPQ8N350 705 aaPredicted RBP15.44■□□□□ 0.06
PCDH1-203ENST00000394536 BCL7CQ8WUZ0 217 aaPredicted RBP15.44■□□□□ 0.06
PCDH1-203ENST00000394536 KLK6Q92876 244 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 FERD3LQ96RJ6 166 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 SGIP1Q9BQI5 828 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 YIPF2Q9BWQ6 316 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 PCDHGA4Q9Y5G9 962 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 TRBV23OR9-2A0A075B6M9 112 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 C1GALT1C1LP0DN25 315 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 CXCR2P25025 360 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 EIF2DP41214 584 aaKnown RBP15.44■□□□□ 0.06
PCDH1-203ENST00000394536 LASP1Q14847 261 aaKnown RBP15.44■□□□□ 0.06
PCDH1-203ENST00000394536 ASB18Q6ZVZ8 466 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 MTSS1LQ765P7 747 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 IQCHQ86VS3 1027 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 EPYCQ99645 322 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 ANKRA2Q9H9E1 313 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 ANKHQ9HCJ1 492 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 IL20RAQ9UHF4 553 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 ERVW-1Q9UQF0 538 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 MAN2B2Q9Y2E5 1009 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 ENPP4Q9Y6X5 453 aa15.44■□□□□ 0.06
PCDH1-203ENST00000394536 ADH1AP07327 375 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 SLC35G4P0C7Q5 338 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 MPC1LP0DKB6 136 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 CCT3P49368 545 aaKnown RBP15.43■□□□□ 0.06
PCDH1-203ENST00000394536 KIAA0040Q15053 153 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 TBCEQ15813 527 aaPredicted RBP15.43■□□□□ 0.06
PCDH1-203ENST00000394536 OR52N2Q8NGI0 321 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 GPR151Q8TDV0 419 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 ZNF486Q96H40 463 aaPredicted RBP15.43■□□□□ 0.06
PCDH1-203ENST00000394536 FCRL4Q96PJ5 515 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 RETREG1Q9H6L5 497 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 STMN3Q9NZ72 180 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 URB1O60287 2271 aaKnown RBP15.43■□□□□ 0.06
PCDH1-203ENST00000394536 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 OR12D1P0DN82 309 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 CD9P21926 228 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 FAM214AQ32MH5 1076 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 ZNF367Q7RTV3 350 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 PTOV1Q86YD1 416 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 SIX5Q8N196 739 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 TBC1D19Q8N5T2 526 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 CXorf40AQ8TE69 158 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 LRR1Q96L50 414 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 KCTD7Q96MP8 289 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 NKIRAS2Q9NYR9 191 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 TBC1D14Q9P2M4 693 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 FEZF1A0PJY2 475 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 PTTG1O95997 202 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 GASTP01350 101 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 CTGFP29279 349 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 IFNGR2P38484 337 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 PFN3P60673 137 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 MRPL58Q14197 206 aaKnown RBP15.43■□□□□ 0.06
PCDH1-203ENST00000394536 FIBINQ8TAL6 211 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 C16orf78Q8WTQ4 265 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 GATAD2BQ8WXI9 593 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 AP3S1Q92572 193 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 TRIM63Q969Q1 353 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 TMEM19Q96HH6 336 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 ZNF222Q9UK12 451 aa15.43■□□□□ 0.06
PCDH1-203ENST00000394536 PRAMEF33A0A0G2JMD5 474 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 ARHGAP33O14559 1287 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 PRAMEF10O60809 474 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 AOC2O75106 756 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 ETHE1O95571 254 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 ACRP10323 421 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 PRKAR1AP10644 381 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 PCSK2P16519 638 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 CELP19835 753 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 PCMT1P22061 227 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 IDSP22304 550 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 GRIN2CQ14957 1233 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms