RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SLC7A4O43246 635 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 MITFO75030 526 aaPredicted RBP12.96□□□□□ -0.34
USP49-203ENST00000394253 TUSC3Q13454 348 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 MELKQ14680 651 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 NFATC4Q14934 902 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 NFIXQ14938 502 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 TMPPEQ6ZT21 453 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 GPR21Q99679 349 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 EIF2B3Q9NR50 452 aaKnown RBP12.96□□□□□ -0.34
USP49-203ENST00000394253 SLC2A8Q9NY64 477 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 MRPS23Q9Y3D9 190 aaKnown RBP12.96□□□□□ -0.34
USP49-203ENST00000394253 TIMM13Q9Y5L4 95 aaPredicted RBP12.96□□□□□ -0.34
USP49-203ENST00000394253 NAP1L6A6NFF2 107 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 BLOC1S5-TXNDC5H3BN57 136 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 BUD23O43709 281 aaKnown RBP12.96□□□□□ -0.34
USP49-203ENST00000394253 KITLGP21583 273 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 MYLK3Q32MK0 819 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 CNKSR3Q6P9H4 555 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 FAM58AQ8N1B3 248 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 TRAM1L1Q8N609 369 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 PAPD5Q8NDF8 572 aaKnown RBP12.96□□□□□ -0.34
USP49-203ENST00000394253 HCN4Q9Y3Q4 1203 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 CEP250Q9BV73 2442 aa12.96□□□□□ -0.34
USP49-203ENST00000394253 TBX10O75333 385 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 MBP02144 154 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 PIM1P11309 404 aaPredicted RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 RAB11BQ15907 218 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 CDC6Q99741 560 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 SRMSQ9H3Y6 488 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 ESR1P03372 595 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 ACTR1BP42025 376 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 RNASE10Q5GAN6 216 aaKnown RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 TMPRSS12Q86WS5 348 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 GAREM1Q9H706 876 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 RTCAO00442 366 aaKnown RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 ZNF207O43670 478 aaKnown RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 ALPPL2P10696 532 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 GP1BBP13224 206 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 SETD1AO15047 1707 aaKnown RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 A0A1B0GVT2 93 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 DGKQP52824 942 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 OR2T35Q8NGX2 323 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 RBP7Q96R05 134 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 GJD2Q9UKL4 321 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 DNMT3AQ9Y6K1 912 aaPredicted RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 LTKP29376 864 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 AQP2P41181 271 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 MAXP61244 160 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 UBE2UQ5VVX9 321 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 VPS29Q9UBQ0 182 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 PPLO60437 1756 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 PHYHO14832 338 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 ADAP00813 363 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 ADH1AP07327 375 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 FPR1P21462 350 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 UBE2G2P60604 165 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 OGDHQ02218 1023 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 EXOSC6Q5RKV6 272 aaKnown RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 KIAA0319Q5VV43 1072 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 PLEKHH3Q7Z736 793 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 ZNF695Q8IW36 515 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 CNTNAP3Q9BZ76 1288 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 SCN5AQ14524 2016 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 PCDH17O14917 1159 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 GRIN3BO60391 1043 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 FMO6PO60774 539 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 PRNPP04156 253 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 XKR5Q6UX68 686 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 NAT16Q8N8M0 369 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 TRIB2Q92519 343 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 PYCR2Q96C36 320 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 P2RY11Q96G91 374 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 RPF2Q9H7B2 306 aaKnown RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 PTGES2Q9H7Z7 377 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 NUBP2Q9Y5Y2 271 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 FAM83FQ8NEG4 500 aaPredicted RBP12.95□□□□□ -0.34
USP49-203ENST00000394253 SLC30A7Q8NEW0 376 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 CDC14AQ9UNH5 594 aa12.95□□□□□ -0.34
USP49-203ENST00000394253 HECW2Q9P2P5 1572 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 TSPAN11A1L157 253 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 FTCDNL1E5RQL4 147 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 ADORA2AP29274 412 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 SLC27A4Q6P1M0 643 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 KCTD20Q7Z5Y7 419 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 CPA6Q8N4T0 437 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 TSSK6Q9BXA6 273 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 REV1Q9UBZ9 1251 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 NAALAD2Q9Y3Q0 740 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 MYPNQ86TC9 1320 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 PAGE1O75459 146 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 PIAS1O75925 651 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 PCCBP05166 539 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 RPL7P18124 248 aaKnown RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 BACE1P56817 501 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 KCNC4Q03721 635 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 ARL16Q0P5N6 197 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms