RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 DUSP26Q9BV47 211 aa22.94■■□□□ 1.26
LRFN4-202ENST00000393952 TMEM184BQ9Y519 407 aaPredicted RBP22.94■■□□□ 1.26
LRFN4-202ENST00000393952 GLOD5A6NK44 160 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 WASHC1A8K0Z3 465 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 TMX2-CTNND1H3BSU7 103 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 DSCR3O14972 297 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 PGRMC2O15173 223 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 CHST10O43529 356 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 GFRA3O60609 400 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 DKK1O94907 266 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 NR2F6P10588 404 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 NUDT2P50583 147 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 MNAT1P51948 309 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 WNT3P56703 355 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 SHC2P98077 582 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 MAT1AQ00266 395 aaKnown RBP22.93■■□□□ 1.26
LRFN4-202ENST00000393952 PAGE3Q5JUK9 113 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 TMEM126BQ8IUX1 230 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 OR8J2Q8NGG1 315 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 SLC7A6OSQ96CW6 309 aaPredicted RBP22.93■■□□□ 1.26
LRFN4-202ENST00000393952 CMKLR1Q99788 373 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 EFCAB1Q9HAE3 211 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 AKAP7Q9P0M2 348 aaPredicted RBP22.93■■□□□ 1.26
LRFN4-202ENST00000393952 LEF1Q9UJU2 399 aaPredicted RBP22.93■■□□□ 1.26
LRFN4-202ENST00000393952 MAU2Q9Y6X3 613 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 FER1L5A0AVI2 2057 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 TBX19O60806 448 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 SCRG1O75711 98 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 ATXN8OSP0DMR3 200 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 CDK4P11802 303 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 FGF5P12034 268 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 BUD31P41223 144 aaPredicted RBP22.93■■□□□ 1.26
LRFN4-202ENST00000393952 SIM1P81133 766 aaPredicted RBP22.93■■□□□ 1.26
LRFN4-202ENST00000393952 MXRA7P84157 204 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 PLIN5Q00G26 463 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 IL11RAQ14626 422 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 FAM47BQ8NA70 645 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.93■■□□□ 1.26
LRFN4-202ENST00000393952 MVB12AQ96EY5 273 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 DEPDC7Q96QD5 511 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 ACTR5Q9H9F9 607 aaPredicted RBP22.93■■□□□ 1.26
LRFN4-202ENST00000393952 MS4A12Q9NXJ0 267 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 MAP10Q9P2G4 905 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 SRPK3Q9UPE1 567 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 LOXL2Q9Y4K0 774 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 SEC16AO15027 2179 aa22.93■■□□□ 1.26
LRFN4-202ENST00000393952 PTPRZ1P23471 2315 aaPredicted RBP22.92■■□□□ 1.26
LRFN4-202ENST00000393952 C1orf226A1L170 272 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 H0YIG0 161 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 POLR1CO15160 346 aaPredicted RBP22.92■■□□□ 1.26
LRFN4-202ENST00000393952 EFNA1P20827 205 aaPredicted RBP22.92■■□□□ 1.26
LRFN4-202ENST00000393952 OR1D4P47884 311 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 RAB38P57729 211 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 SYT16Q17RD7 645 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 MPEG1Q2M385 716 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 COQ5Q5HYK3 327 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 C1orf189Q5VU69 101 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 FAM180BQ6P0A1 224 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 CYB5D1Q6P9G0 228 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 ANKRD46Q86W74 232 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 BPHLQ86WA6 291 aaPredicted RBP22.92■■□□□ 1.26
LRFN4-202ENST00000393952 RBM15BQ8NDT2 890 aaKnown RBP22.92■■□□□ 1.26
LRFN4-202ENST00000393952 CIDECQ96AQ7 238 aaPredicted RBP22.92■■□□□ 1.26
LRFN4-202ENST00000393952 EXOSC8Q96B26 276 aaKnown RBP22.92■■□□□ 1.26
LRFN4-202ENST00000393952 BHLHE41Q9C0J9 482 aaPredicted RBP22.92■■□□□ 1.26
LRFN4-202ENST00000393952 SLC7A5P2Q9GIP4 190 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 FBXO8Q9NRD0 319 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 ATAD3AQ9NVI7 634 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 EHD3Q9NZN3 535 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 CLCA2Q9UQC9 943 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 SPACA6W5XKT8 324 aa22.92■■□□□ 1.26
LRFN4-202ENST00000393952 A0A1B0GX78 115 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 FAM227AF5H4B4 570 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 CYR61O00622 381 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 HNRNPCL1O60812 293 aaKnown RBP22.91■■□□□ 1.26
LRFN4-202ENST00000393952 SCN2BO60939 215 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 ACTN3Q08043 901 aaPredicted RBP22.91■■□□□ 1.26
LRFN4-202ENST00000393952 MAPKAPK3Q16644 382 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 RHBDD2Q6NTF9 364 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 RAB11FIP2Q7L804 512 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 LIN37Q96GY3 246 aaPredicted RBP22.91■■□□□ 1.26
LRFN4-202ENST00000393952 ZNF764Q96H86 408 aaPredicted RBP22.91■■□□□ 1.26
LRFN4-202ENST00000393952 WDR41Q9HAD4 459 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 FAM120CQ9NX05 1096 aaKnown RBP22.91■■□□□ 1.26
LRFN4-202ENST00000393952 SLC39A1Q9NY26 324 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 TAS2R1Q9NYW7 299 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 CES1P1Q9UKY3 287 aa22.91■■□□□ 1.26
LRFN4-202ENST00000393952 CEP250Q9BV73 2442 aa22.9■■□□□ 1.26
LRFN4-202ENST00000393952 B4E171 279 aa22.9■■□□□ 1.26
LRFN4-202ENST00000393952 RNH1P13489 461 aaKnown RBP22.9■■□□□ 1.26
LRFN4-202ENST00000393952 ITIH1P19827 911 aa22.9■■□□□ 1.26
LRFN4-202ENST00000393952 ITGAXP20702 1163 aa22.9■■□□□ 1.26
LRFN4-202ENST00000393952 TLX1P31314 330 aaPredicted RBP22.9■■□□□ 1.26
LRFN4-202ENST00000393952 TSPAN7P41732 249 aa22.9■■□□□ 1.26
LRFN4-202ENST00000393952 HNRNPFP52597 415 aaKnown RBP22.9■■□□□ 1.26
LRFN4-202ENST00000393952 SLC25A3Q00325 362 aa22.9■■□□□ 1.26
LRFN4-202ENST00000393952 ART3Q13508 389 aa22.9■■□□□ 1.26
LRFN4-202ENST00000393952 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.9■■□□□ 1.26
LRFN4-202ENST00000393952 SLC48A1Q6P1K1 146 aa22.9■■□□□ 1.26
LRFN4-202ENST00000393952 MSANTD1Q6ZTZ1 278 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms