RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 SPANXN4Q5MJ08 99 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 IL23RQ5VWK5 629 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 PRAMEF7Q5VXH5 474 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 RTL6Q6ICC9 239 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 FAM53AQ6NSI3 398 aaPredicted RBP2.56□□□□□ -2
TRAJ40-201ENST00000390497 FAM159AQ6UWV7 190 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 MCM10Q7L590 875 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 PTAR1Q7Z6K3 402 aaPredicted RBP2.56□□□□□ -2
TRAJ40-201ENST00000390497 ZER1Q7Z7L7 766 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 SYVN1Q86TM6 617 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 APLFQ8IW19 511 aaPredicted RBP2.56□□□□□ -2
TRAJ40-201ENST00000390497 GVQW1Q8N7I0 195 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 NUP37Q8NFH4 326 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 OR5M9Q8NGP3 310 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 SMPDL3AQ92484 453 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 WBP2Q969T9 261 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 RAB39BQ96DA2 213 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 MRPL38Q96DV4 380 aaKnown RBP2.56□□□□□ -2
TRAJ40-201ENST00000390497 C2orf48Q96LS8 159 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 SAMD8Q96LT4 415 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 ERGIC2Q96RQ1 377 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 NODALQ96S42 347 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 CBWD1Q9BRT8 395 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 CLEC7AQ9BXN2 247 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 DPEP3Q9H4B8 488 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 FNDC4Q9H6D8 234 aaPredicted RBP2.56□□□□□ -2
TRAJ40-201ENST00000390497 MED20Q9H944 212 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 C3orf14Q9HBI5 128 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.56□□□□□ -2
TRAJ40-201ENST00000390497 ATAD3AQ9NVI7 634 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 COPS7AQ9UBW8 275 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 NARFQ9UHQ1 456 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 MRTO4Q9UKD2 239 aaKnown RBP2.56□□□□□ -2
TRAJ40-201ENST00000390497 NUDCQ9Y266 331 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 WIPI2Q9Y4P8 454 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 OR1A2Q9Y585 309 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 NEDD4P46934 1319 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 FAM205AQ6ZU69 1335 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 KIAA1217Q5T5P2 1943 aa2.56□□□□□ -2
TRAJ40-201ENST00000390497 LOC105371242A0A075B767 164 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 MEIOCA2RUB1 952 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 CUX2O14529 1486 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 CPLX1O14810 134 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 CLDN3O15551 220 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 TNFSF12O43508 249 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 KIAA0513O60268 411 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 CSDE1O75534 798 aaKnown RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 TGFAP01135 160 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 IGHEP01854 428 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 HEXBP07686 556 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 LYNP07948 512 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 TPBGLP0DKB5 382 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 MBL2P11226 248 aaPredicted RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 GLRA1P23415 457 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 EDNRAP25101 427 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 RPA1P27694 616 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 GJB2P29033 226 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 PPP2R1AP30153 589 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 SLC6A8P48029 635 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 PITPNBP48739 271 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 ABCE1P61221 599 aaKnown RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 SNRPD1P62314 119 aaKnown RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 PDZK1IP1Q13113 114 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 MSLNQ13421 630 aaPredicted RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 SNX1Q13596 522 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 HNRNPDQ14103 355 aaKnown RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 TAF7Q15545 349 aaPredicted RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 ZNF876PQ49A33 203 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 EPC2Q52LR7 807 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 FASTKD1Q53R41 847 aaKnown RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 TAF1BQ53T94 588 aaPredicted RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 DNAJC21Q5F1R6 531 aaKnown RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 FFAR4Q5NUL3 377 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 IRGCQ6NXR0 463 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 TRIM65Q6PJ69 517 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 ABRAXAS1Q6UWZ7 409 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 CWC27Q6UX04 472 aaKnown RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 C3P1Q6ZMU1 363 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 C1orf186Q6ZWK4 172 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 CACUL1Q86Y37 369 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 DCLK2Q8N568 766 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 ARL6IP6Q8N6S5 226 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 RNF148Q8N7C7 305 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 CCDC197Q8NCU1 140 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 FAM76AQ8TAV0 307 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 HCAR2Q8TDS4 363 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 SMAP2Q8WU79 429 aaPredicted RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 PTPRUQ92729 1446 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 SLCO2A1Q92959 643 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 NCLNQ969V3 563 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 LRR1Q96L50 414 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 USP28Q96RU2 1077 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 AGPAT1Q99943 283 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 SYT15Q9BQS2 421 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 PIGQQ9BRB3 760 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 FICDQ9BVA6 458 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 FUNDC2Q9BWH2 189 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 PINK1Q9BXM7 581 aa2.55□□□□□ -2
TRAJ40-201ENST00000390497 FAM124BQ9H5Z6 455 aaPredicted RBP2.55□□□□□ -2
TRAJ40-201ENST00000390497 COG4Q9H9E3 785 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms