RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TAS2R50P59544 299 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 TRA2BP62995 288 aaKnown RBP17.71■□□□□ 0.43
SMN2-202ENST00000380742 TNFRSF17Q02223 184 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 ZNF763Q0D2J5 394 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 CLN3Q13286 438 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 DNASE1L3Q13609 305 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 FAM69BQ5VUD6 431 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 SHISA6Q6ZSJ9 500 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 ACAD11Q709F0 780 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 PRSS58Q8IYP2 241 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 LIX1Q8N485 282 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 MIEF2Q96C03 454 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 OR1F2PQ96R84 312 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 CCDC28BQ9BUN5 200 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 TMEM120AQ9BXJ8 343 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 SOX17Q9H6I2 414 aaPredicted RBP17.71■□□□□ 0.43
SMN2-202ENST00000380742 TCF7L2Q9NQB0 619 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 MS4A12Q9NXJ0 267 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 ASIC5Q9NY37 505 aa17.71■□□□□ 0.43
SMN2-202ENST00000380742 CEP295Q9C0D2 2601 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 PSMD12O00232 456 aaPredicted RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 SHOX2O60902 331 aaPredicted RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 B4GALT2O60909 372 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 CDC123O75794 336 aaPredicted RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 AIFM1O95831 613 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 IL3P08700 152 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 IL10P22301 178 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 MAPK1P28482 360 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 MC1RQ01726 317 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 KLC1Q07866 573 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 MAD2L1Q13257 205 aaPredicted RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 TUBB8Q3ZCM7 444 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 NDUFAF5Q5TEU4 345 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 TMEM198Q66K66 360 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 MED25Q71SY5 747 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 MMP21Q8N119 569 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 CLHC1Q8NHS4 586 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 CDC26Q8NHZ8 85 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 SNIP1Q8TAD8 396 aaKnown RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 ADAMTS18Q8TE60 1221 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 STON2Q8WXE9 905 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 NAF1Q96HR8 494 aaKnown RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 TSSK3Q96PN8 268 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 FAM107BQ9H098 131 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 MYNNQ9NPC7 610 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 NOP53Q9NZM5 478 aaKnown RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 KLHL14Q9P2G3 628 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 HEY2Q9UBP5 337 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 EIF3LQ9Y262 564 aaKnown RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 FARSAQ9Y285 508 aaKnown RBP17.7■□□□□ 0.42
SMN2-202ENST00000380742 SPACA6W5XKT8 324 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 NCOR2Q9Y618 2525 aa17.7■□□□□ 0.42
SMN2-202ENST00000380742 WASHC1A8K0Z3 465 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 C1QTNF9BB2RNN3 333 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 C21orf140B9A014 251 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 C1QTNF9P0C862 333 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 NR2F6P10588 404 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 G6PDP11413 515 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 PRPS2P11908 318 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 BUD31P41223 144 aaPredicted RBP17.69■□□□□ 0.42
SMN2-202ENST00000380742 RPS18P62269 152 aaKnown RBP17.69■□□□□ 0.42
SMN2-202ENST00000380742 SRSF6Q13247 344 aaKnown RBP17.69■□□□□ 0.42
SMN2-202ENST00000380742 PTGR1Q14914 329 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 FAM71E1Q6IPT2 247 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 SPATA19Q7Z5L4 167 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 CLNKQ7Z7G1 428 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 VASH2Q86V25 355 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 ZNF248Q8NDW4 579 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 GPR87Q9BY21 358 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 RABEP2Q9H5N1 569 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 C14orf105Q9NVL8 296 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 IL17BQ9UHF5 180 aa17.69■□□□□ 0.42
SMN2-202ENST00000380742 EXO1Q9UQ84 846 aaKnown RBP17.69■□□□□ 0.42
SMN2-202ENST00000380742 PTRH2Q9Y3E5 179 aaKnown RBP17.69■□□□□ 0.42
SMN2-202ENST00000380742 GLOD5A6NK44 160 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 E9PBE3 544 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 PGRMC2O15173 223 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 KLHL41O60662 606 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 GUCY1B2O75343 617 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 RECKO95980 971 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 CD63P08962 238 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 LIFP15018 202 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 PTPN4P29074 926 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 TLX1P31314 330 aaPredicted RBP17.68■□□□□ 0.42
SMN2-202ENST00000380742 GSTM5P46439 218 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 ARFIP2P53365 341 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 RPS15P62841 145 aaKnown RBP17.68■□□□□ 0.42
SMN2-202ENST00000380742 BTG2P78543 158 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 C2orf80Q0P641 193 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 MINDY4Q4G0A6 757 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 CPLX4Q7Z7G2 160 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 PARP9Q8IXQ6 854 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 TMEM132CQ8N3T6 1108 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 OR2Y1Q8NGV0 311 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 C10orf82Q8WW14 230 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 KCNE4Q8WWG9 221 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 MARK4Q96L34 752 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 ELAC2Q9BQ52 826 aaKnown RBP17.68■□□□□ 0.42
SMN2-202ENST00000380742 VN1R1Q9GZP7 353 aa17.68■□□□□ 0.42
SMN2-202ENST00000380742 NSRP1Q9H0G5 558 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms